Factsheet for VIT_08s0007g01930.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66032	Soybean	cytosol	67.61	71.52
KRH75833	Soybean	cytosol	67.21	70.04
Solyc09g014280.1.1	Tomato	cytosol, plastid	64.37	69.13
PGSC0003DMT400052409	Potato	cytosol, plastid	64.37	69.13
CDY40314	Canola	cytosol	63.16	68.42
AT5G01210.1	Thale cress	cytosol	65.79	68.42
Bra028893.1-P	Field mustard	cytosol, plastid	65.99	68.06
Bra009632.1-P	Field mustard	plastid	56.68	67.63
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	66.6	67.56
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	65.38	63.96
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	64.37	62.6
GSMUA_Achr10P...	Banana	plastid	47.17	55.61
GSMUA_Achr8P19570_001	Banana	plastid	47.17	55.21
GSMUA_AchrUn_...	Banana	plastid	45.34	53.98
Os01t0854000-01	Rice	plastid	51.01	52.17
Zm00001d042826_P001	Maize	plastid	51.01	52.07
EES01771	Sorghum	plastid	51.42	51.31
Os05t0449200-01	Rice	plastid	49.6	51.04
TraesCS3D01G360900.1	Wheat	plastid	50.81	50.91
TraesCS3B01G399600.1	Wheat	plastid	50.61	50.81
TraesCS3A01G367900.1	Wheat	plastid	50.61	50.71
Zm00001d012333_P001	Maize	plastid	51.21	49.61
Zm00001d010079_P001	Maize	plastid	50.0	49.6
EES19625	Sorghum	plastid	50.81	48.74
VIT_18s0001g10240.t01	Wine grape	cytosol	13.16	48.15
HORVU3Hr1G085100.2	Barley	plastid	50.4	46.63
TraesCS1A01G278800.1	Wheat	cytosol, plastid	49.6	46.4
TraesCS1B01G287800.1	Wheat	cytosol, plastid	49.19	46.11
HORVU1Hr1G073330.1	Barley	cytosol	49.39	43.81
VIT_18s0001g10180.t01	Wine grape	cytosol	39.68	43.17
TraesCS1D01G278100.1	Wheat	plastid	49.39	42.73
VIT_07s0031g00300.t01	Wine grape	plastid	15.99	41.58
VIT_18s0001g10200.t01	Wine grape	cytosol	26.11	40.69
VIT_18s0001g10230.t01	Wine grape	cytosol	27.13	40.24
VIT_07s0031g00290.t01	Wine grape	cytosol	13.77	39.53
VIT_07s0031g00280.t01	Wine grape	cytosol	10.12	39.37
VIT_07s0031g00310.t01	Wine grape	cytosol	10.12	39.37
VIT_02s0109g00390.t01	Wine grape	cytosol	9.31	38.33
VIT_00s0410g00040.t01	Wine grape	cytosol	9.31	38.33
VIT_07s0031g00270.t01	Wine grape	cytosol	32.79	36.16
VIT_16s0050g00830.t01	Wine grape	cytosol	30.16	33.48
VIT_16s0050g00870.t01	Wine grape	cytosol	31.17	25.97

Protein Annotations

EntrezGene:100257936	wikigene:100257936	Gene3D:3.30.559.10	MapMan:35.1	EMBL:AM483299	ProteinID:CAN62119
ProteinID:CAN62119.1	InterPro:CAT-like_dom_sf	ProteinID:CCB55509	ProteinID:CCB55509.1	UniProt:F6HKT9	EMBL:FN595991
GO:GO:0003674	GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:IPR023213	EntrezGene:LOC100257936
wikigene:LOC100257936	PFAM:PF02458	PANTHER:PTHR31896	PANTHER:PTHR31896:SF5	SUPFAM:SSF52777	TIGR:TC63533
TIGR:TC67239	InterPro:Transferase	UniParc:UPI0002108B06	ArrayExpress:VIT_08s0007g01930	EnsemblPlantsGene:VIT_08s0007g01930	EnsemblPlants:VIT_08s0007g01930.t01
RefSeq:XP_002278801	RefSeq:XP_002278801.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:16006186..16008061

Molecular Weight (calculated)

54722.5 Da

IEP (calculated)

8.927

GRAVY (calculated)

-0.268

Length

494 amino acids

Sequence
(BLAST)

001: MPSSSVTLVS KCTVYPEHKS TIKSLKLSVS DLPMLSCQYI QKGVLHTRPP LPIDSLISLL KQSLSTALTH FPPLAGRFET DADGHVHIIC NDAGVEFIHA
101: KAKHFLIRDL LSPVDVHNCF KQFFAFDGLL SYAGHFKPLA AVQITELADG LFIGCTVNHS VTDGTSFWHF FNTFAEMTKG AKKISRSPDF NRDNVFNSPV
201: VLRVPEGGPR LTFSGDEPLR ERIFRFHREA ILKLKYRANN QIQKSTNGQV LDMGEILGKR SNDSWKTING ENGMDNGKKT SVLGKLLKNN VSKPLDSETG
301: IPNSTAEISS FQSLSAQLWR SVTRARKLPS SRTTTFRMAV NCRHRLEPKL EAHYFGNAIQ SIPTVASVGE LLSRDLRWCA DLLHKNVVAH DDATVQRGVR
401: DWESNPRCFP LGNFDGAMIT MGSSPRFPMY DNDFGWGRPL AVRSGKANKF DGKISAFPGR DGAGTVDLEV CLAPETMAGL ESDPEFMQYV SGMV

Best Arabidopsis Sequence Match ( AT5G01210.1 )
(BLAST)

001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC

Arabidopsis Description

AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.