Factsheet for VIT_00s0410g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 3
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0109g00390.t01	Wine grape	cytosol	92.5	92.5
VIT_07s0031g00290.t01	Wine grape	cytosol	45.83	31.98
VIT_18s0001g10200.t01	Wine grape	cytosol	83.33	31.55
VIT_18s0001g10230.t01	Wine grape	cytosol	85.0	30.63
VIT_18s0001g10180.t01	Wine grape	cytosol	87.5	23.13
VIT_07s0031g00270.t01	Wine grape	cytosol	50.83	13.62
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	42.5	10.47
VIT_08s0007g01930.t01	Wine grape	plastid	38.33	9.31
VIT_16s0050g00830.t01	Wine grape	cytosol	29.17	7.87
VIT_16s0050g00870.t01	Wine grape	cytosol	29.17	5.9
VIT_18s0001g10240.t01	Wine grape	cytosol	2.5	2.22
VIT_07s0031g00310.t01	Wine grape	cytosol	0.0	0.0
CDX97348	Canola	cytosol	0.0	0.0
VIT_07s0031g00300.t01	Wine grape	plastid	0.0	0.0
VIT_07s0031g00280.t01	Wine grape	cytosol	0.0	0.0
CDY66079	Canola	cytosol	0.0	0.0
CDY61372	Canola	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_00s0410g00040	EMBL:FN596282	EnsemblPlants:VIT_00s0410g00040.t01	EnsemblPlantsGene:VIT_00s0410g00040	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF6	PFAM:PF02458	ProteinID:CCB59137	ProteinID:CCB59137.1	UniParc:UPI0002109F84
UniProt:F6HWS3	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:28036731..28037309

Molecular Weight (calculated)

13081.6 Da

IEP (calculated)

6.286

GRAVY (calculated)

0.175

Length

120 amino acids

Sequence
(BLAST)

001: MATLLDRLKN SLALTLDHFY PHAGHLVTKK EDSSPSYMVF VGYNNSPGAQ FIHAAADMTI SGILSSIYIP QVLQSFFDHD RVINHDGHTL SLLSIQVTGL
101: VDGIFIGCST NHSMVDGTSF

Best Arabidopsis Sequence Match ( AT5G07870.1 )
(BLAST)

001: MDSSSSEVRI ISKCFVKPKT IPQKWKEPYH FSPTDHIMLS IHYIQKGLLF LKPSFSESVK PKEFMETLLQ KLKDSLAIAL VHFYPLAGRL STLKTDNSRS
101: HSVFVDCNNS PGARFIHAES DLSVSDILGS TYVPLVVQSL FDHHKALNRD GYTMSLLSIK VTELVDGVFI GLSMNHSLGD GSSFWQFFNS LSEIFNSQEE
201: TIGNNNNNNN NALLCLKNPP IIREATGPMY SLPFSEPNES LSQSEPPVLK ERMFHFSSET VRSLKSKANQ ECGTTMISSF QALTALIWRS ITRARKLPND
301: QETTCRFAAG NRSRMNPPLP TNQFGVYISL VKTTTKIGNL LENEFGWIAL KLHQAVTEHT GEKISYEIDQ MLKSPLPLQA YRLSNLNIVH MGSSPRFNKY
401: GSEFGMGKAV AVRSGYGGKY DGKVSAYPGR QGGASIDLEV CLLPEFMEAL ESDQEFMSLV SSST

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD97]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.