Factsheet for VIT_18s0001g10240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G414500.1	Wheat	cytosol	28.15	41.3
VIT_07s0031g00280.t01	Wine grape	cytosol	38.52	40.94
VIT_07s0031g00310.t01	Wine grape	cytosol	35.56	37.8
VIT_07s0031g00300.t01	Wine grape	plastid	37.78	26.84
VIT_18s0001g10180.t01	Wine grape	cytosol	81.48	24.23
Solyc04g078350.1.1	Tomato	cytosol	27.41	22.42
TraesCS4A01G426400.1	Wheat	cytosol	45.93	17.51
GSMUA_Achr7P13950_001	Banana	plastid	55.56	16.41
EER87685	Sorghum	mitochondrion	51.11	14.97
Os06t0103200-01	Rice	mitochondrion	47.41	13.88
VIT_18s0001g10200.t01	Wine grape	cytosol	32.59	13.88
OQU91799	Sorghum	mitochondrion	48.15	13.8
GSMUA_Achr5P06650_001	Banana	cytosol	46.67	13.76
Zm00001d035865_P001	Maize	mitochondrion	48.15	13.68
TraesCS7D01G057300.1	Wheat	mitochondrion	46.67	13.4
VIT_08s0007g01930.t01	Wine grape	plastid	48.15	13.16
TraesCS7A01G002700.1	Wheat	plastid	45.19	12.84
EER87684	Sorghum	plastid	46.67	12.78
TraesCS7D01G003400.1	Wheat	plastid	44.44	12.77
Os11t0244100-00	Rice	mitochondrion	45.19	12.76
TraesCS4A01G401500.1	Wheat	plastid	45.19	12.76
HORVU7Hr1G000970.1	Barley	plastid	46.67	12.7
TraesCS4A01G495900.1	Wheat	plastid	44.44	12.66
Os07t0142700-00	Rice	plastid	44.44	12.63
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	45.19	12.53
TraesCS7D01G531500.1	Wheat	mitochondrion	42.96	12.21
VIT_07s0031g00270.t01	Wine grape	cytosol	38.52	11.61
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	40.0	11.51
TraesCS3D01G128500.1	Wheat	mitochondrion	39.26	11.3
TraesCS3A01G127300.1	Wheat	plastid	39.26	11.3
VIT_16s0050g00830.t01	Wine grape	cytosol	37.04	11.24
HORVU3Hr1G023780.1	Barley	plastid	39.26	10.91
VIT_16s0050g00870.t01	Wine grape	cytosol	38.52	8.77
VIT_18s0001g10230.t01	Wine grape	cytosol	6.67	2.7
VIT_02s0109g00390.t01	Wine grape	cytosol	2.22	2.5
VIT_00s0410g00040.t01	Wine grape	cytosol	2.22	2.5
VIT_07s0031g00290.t01	Wine grape	cytosol	2.22	1.74

Protein Annotations

ArrayExpress:VIT_18s0001g10240	EMBL:FN595227	EnsemblPlants:VIT_18s0001g10240.t01	EnsemblPlantsGene:VIT_18s0001g10240	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF6	PFAM:PF02458	ProteinID:CCB45825	ProteinID:CCB45825.1	UniParc:UPI000210A93B
UniProt:F6H1B6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr18:+:8572722..8574101

Molecular Weight (calculated)

14651.5 Da

IEP (calculated)

6.082

GRAVY (calculated)

0.063

Length

135 amino acids

Sequence
(BLAST)

001: MVSGIATAGE LLEHNLGWAA WILHKAVVSH TDKAVRGWLE SWLQSPVVYQ LGLFFYPNNV IIGSSPRFNK YGNEFGLGKA LALRSGNAHK FDGMVSCYPG
101: REGGGSIDLE VCLTLNSMST LESNPEFMEA VSISS

Best Arabidopsis Sequence Match ( AT5G42830.1 )
(BLAST)

001: MDSSSSVKIV SKSFVKPKTL PEESKQPYYL SPWDYAMLSV QYIQKGLLFH KPPLDSIDTL LEKLKDSLAV TLVHFYPLAG RLSSLTTEKP KSYSVFVDCN
101: DSPGAGFIYA TSDLCIKDIV GAKYVPSIVQ SFFDHHKAVN HDGHTMSLLS VQVTELVDGI FIGLSMNHAM GDGTAFWKFF TAWSEIFQGQ ESNQNDDLCL
201: KNPPVLKRYI PEGYGPLFSL PYSHPDEFIR TYESPILKER MFCFSSETIR MLKTRVNQIC GTTSISSFQS LTAVIWRCIT RARRLPLDRE TSCRVAADNR
301: GRMYPPLHKD YFGNCLSALR TAAKAGELLE NDLGFAALKV HQAVAEHTSE KVSQMIDQWL KSPYIYHIDR LFEPMSVMMG SSPRFNKYGC EFGLGKGVTL
401: RSGYAHKFDG KVSAYPGREG GGSIDLEVCL VPEFMEALES DEEFMSLVSL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.