Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G128500.1 | Wheat | mitochondrion | 96.38 | 96.38 |
| TraesCS3B01G146500.1 | Wheat | cytosol, mitochondrion, plastid | 95.95 | 95.95 |
| HORVU3Hr1G023780.1 | Barley | plastid | 93.82 | 90.53 |
| OQU91799 | Sorghum | mitochondrion | 65.03 | 64.76 |
| TraesCS4A01G401500.1 | Wheat | plastid | 65.88 | 64.64 |
| TraesCS4A01G495900.1 | Wheat | plastid | 65.03 | 64.35 |
| Os11t0244100-00 | Rice | mitochondrion | 64.18 | 62.97 |
| TraesCS4A01G426400.1 | Wheat | cytosol | 47.33 | 62.71 |
| Os06t0103200-01 | Rice | mitochondrion | 61.62 | 62.69 |
| EER87685 | Sorghum | mitochondrion | 61.62 | 62.69 |
| TraesCS7A01G002700.1 | Wheat | plastid | 63.33 | 62.53 |
| Os07t0142700-00 | Rice | plastid | 62.47 | 61.68 |
| Zm00001d035865_P001 | Maize | mitochondrion | 58.42 | 57.68 |
| EER87684 | Sorghum | plastid | 59.7 | 56.8 |
| GSMUA_Achr7P13950_001 | Banana | plastid | 42.86 | 43.98 |
| GSMUA_Achr5P06650_001 | Banana | cytosol | 40.72 | 41.7 |
| KRH40990 | Soybean | extracellular | 26.65 | 40.98 |
| KRH52020 | Soybean | cytosol | 38.38 | 39.47 |
| Bra035334.1-P | Field mustard | cytosol | 37.74 | 39.42 |
| CDY02424 | Canola | cytosol | 37.74 | 39.42 |
| VIT_18s0001g10240.t01 | Wine grape | cytosol | 11.3 | 39.26 |
| Bra028682.1-P | Field mustard | cytosol | 32.62 | 39.23 |
| KRH40991 | Soybean | cytosol | 34.33 | 39.17 |
| AT5G42830.1 | Thale cress | cytosol | 37.53 | 39.11 |
| CDY21238 | Canola | cytosol | 37.31 | 38.98 |
| KRH61321 | Soybean | cytosol | 37.95 | 38.7 |
| TraesCS2A01G467400.1 | Wheat | cytosol | 38.59 | 38.59 |
| VIT_18s0001g10180.t01 | Wine grape | cytosol | 37.31 | 38.55 |
| KRH52019 | Soybean | cytosol | 37.53 | 38.51 |
| KRH61316 | Soybean | cytosol | 37.74 | 38.39 |
| CDY14027 | Canola | cytosol, nucleus, plastid | 33.48 | 38.2 |
| CDY40772 | Canola | cytosol, nucleus, plastid | 33.48 | 38.01 |
| KRH61319 | Soybean | cytosol, mitochondrion, nucleus | 37.95 | 37.95 |
| KRH61322 | Soybean | cytosol | 25.16 | 37.94 |
| TraesCS1A01G286400.1 | Wheat | cytosol | 37.53 | 37.93 |
| KRH61619 | Soybean | cytosol | 36.89 | 37.61 |
| KRH61317 | Soybean | vacuole | 32.41 | 37.53 |
| TraesCS2A01G042800.1 | Wheat | cytosol | 37.31 | 37.47 |
| CDX71519 | Canola | cytosol, nucleus, plastid | 35.82 | 37.42 |
| AT5G07860.1 | Thale cress | cytosol | 36.03 | 37.22 |
| TraesCS1A01G286500.1 | Wheat | cytosol | 34.75 | 37.13 |
| AT5G07850.1 | Thale cress | cytosol | 36.03 | 37.06 |
| Solyc04g078660.1.1 | Tomato | cytosol | 35.39 | 37.05 |
| TraesCS3A01G024800.1 | Wheat | cytosol, extracellular, plastid | 34.75 | 36.88 |
| TraesCS1A01G008500.1 | Wheat | cytosol, plastid | 37.1 | 36.86 |
| TraesCS3A01G025000.1 | Wheat | cytosol | 23.03 | 36.86 |
| PGSC0003DMT400020526 | Potato | cytosol | 35.39 | 36.48 |
| CDX81073 | Canola | cytosol | 35.82 | 36.44 |
| Solyc04g078350.1.1 | Tomato | cytosol | 12.79 | 36.36 |
| VIT_18s0001g10230.t01 | Wine grape | cytosol | 25.8 | 36.34 |
| PGSC0003DMT400084781 | Potato | cytosol | 34.75 | 36.22 |
| TraesCS2A01G035800.1 | Wheat | cytosol | 35.82 | 35.9 |
| AT5G07870.1 | Thale cress | cytosol | 35.18 | 35.56 |
| CDX78313 | Canola | cytosol | 35.39 | 35.24 |
| CDX81074 | Canola | plastid | 34.54 | 35.22 |
| VIT_18s0001g10200.t01 | Wine grape | cytosol | 23.67 | 35.02 |
| KRH61320 | Soybean | cytosol, plastid | 36.25 | 34.98 |
| TraesCS1A01G029500.1 | Wheat | peroxisome, plastid | 35.18 | 34.96 |
| TraesCS2A01G006700.1 | Wheat | cytosol | 32.2 | 34.87 |
| TraesCS4A01G350100.1 | Wheat | cytosol | 34.97 | 34.82 |
| TraesCS2A01G035600.1 | Wheat | cytosol | 21.11 | 34.74 |
| TraesCS3A01G367900.1 | Wheat | plastid | 36.25 | 34.48 |
| Bra028681.1-P | Field mustard | cytosol | 33.26 | 34.36 |
| TraesCS1A01G278800.1 | Wheat | cytosol, plastid | 38.17 | 33.9 |
| TraesCS1A01G341300.1 | Wheat | golgi, unclear | 32.2 | 33.78 |
| TraesCS2A01G036200.1 | Wheat | cytosol | 36.46 | 33.53 |
| CDY40771 | Canola | cytosol | 33.26 | 32.16 |
| TraesCS2A01G035900.1 | Wheat | mitochondrion | 36.46 | 31.9 |
| TraesCS2A01G006200.1 | Wheat | cytosol | 33.05 | 29.87 |
| CDY14026 | Canola | cytosol | 15.56 | 28.52 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G127300.1 | EnsemblPlantsGene:TraesCS3A01G127300 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31896 | PANTHER:PTHR31896:SF14 |
| PFAM:PF02458 | SEG:seg | SUPFAM:SSF52777 | MapMan:50.2.3 | : | : |
Description
No Description!
Coordinates
chr3A:-:102623495..102624904
Molecular Weight (calculated)
49534.6 Da
IEP (calculated)
5.487
GRAVY (calculated)
-0.059
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPSPVCVV SSRTVKPPAR PRERIPLATW DVSMINANYI QKGLLFPAPP PPFSTGAAVT SHLADALAEA LGGDYYPVAG RFVTDRHRDD SGAVVGCSVS
101: IDCDGQGVEV VHAVADGVAA ADVVPPDADV PSVVEDLFTL NDAINYDGHE LPLFAAQVTE LADGGVFVGF VCNHALADGT AFWNFLKALA EISRARLAPP
201: GDPQLPTSSP RPMFERWSPD GGTAAPVVLP CKDLPELIER PARVPLRGRV LHFTAESMAA LKEQAREELL AAGDAAGAAA LTRYQGLTSL IWRCITRARR
301: LAPDDETAFR GAANNRGRLR PALPAEYFGN SLYAVSTEPV RVSELLARGG HGRGAAAVGR AVAANTDASI RARVAAWTAE PVVTVRLTMM GGSPWFDAYG
401: CDFGWGKPTA VRSGRANKND GRTVLYPGRE GGGSVDAEVS LSPEHMAALE LDDELRAAVS SSRANFVSL
101: IDCDGQGVEV VHAVADGVAA ADVVPPDADV PSVVEDLFTL NDAINYDGHE LPLFAAQVTE LADGGVFVGF VCNHALADGT AFWNFLKALA EISRARLAPP
201: GDPQLPTSSP RPMFERWSPD GGTAAPVVLP CKDLPELIER PARVPLRGRV LHFTAESMAA LKEQAREELL AAGDAAGAAA LTRYQGLTSL IWRCITRARR
301: LAPDDETAFR GAANNRGRLR PALPAEYFGN SLYAVSTEPV RVSELLARGG HGRGAAAVGR AVAANTDASI RARVAAWTAE PVVTVRLTMM GGSPWFDAYG
401: CDFGWGKPTA VRSGRANKND GRTVLYPGRE GGGSVDAEVS LSPEHMAALE LDDELRAAVS SSRANFVSL
001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK
Arabidopsis Description
At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.