Factsheet for TraesCS3A01G025000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G012940.1	Barley	cytosol	31.74	47.69
TraesCS2A01G042800.1	Wheat	cytosol	64.51	40.47
TraesCS2A01G467400.1	Wheat	cytosol	61.43	38.38
TraesCS3A01G024800.1	Wheat	cytosol, extracellular, plastid	57.0	37.78
HORVU2Hr1G006540.2	Barley	mitochondrion	58.02	35.42
TraesCS4A01G350100.1	Wheat	cytosol	55.97	34.82
TraesCS3D01G021100.1	Wheat	cytosol	37.2	34.71
EES13245	Sorghum	cytosol	55.63	34.46
Zm00001d035064_P001	Maize	cytosol	57.0	34.29
TraesCS2A01G035600.1	Wheat	cytosol	33.11	34.04
TraesCS2A01G035800.1	Wheat	cytosol	54.27	33.97
KXG24241	Sorghum	cytosol	52.9	33.48
TraesCS1A01G286400.1	Wheat	cytosol	49.15	31.03
TraesCS1A01G008500.1	Wheat	cytosol, plastid	49.83	30.93
TraesCS1A01G029500.1	Wheat	peroxisome, plastid	49.83	30.93
TraesCS2A01G036200.1	Wheat	cytosol	52.22	30.0
TraesCS1A01G286500.1	Wheat	cytosol	43.34	28.93
TraesCS2A01G006700.1	Wheat	cytosol	42.66	28.87
TraesCS2A01G035900.1	Wheat	mitochondrion	52.56	28.73
TraesCS2A01G006200.1	Wheat	cytosol	49.49	27.94
TraesCS4A01G426400.1	Wheat	cytosol	32.76	27.12
TraesCS3A01G127300.1	Wheat	plastid	36.86	23.03
TraesCS4A01G495900.1	Wheat	plastid	37.2	23.0
TraesCS7A01G002700.1	Wheat	plastid	36.52	22.53
Zm00001d035057_P001	Maize	extracellular	55.97	22.13
TraesCS4A01G401500.1	Wheat	plastid	35.49	21.76
TraesCS3A01G367900.1	Wheat	plastid	33.79	20.08
TraesCS1A01G341300.1	Wheat	golgi, unclear	29.69	19.46
TraesCS1A01G278800.1	Wheat	cytosol, plastid	34.81	19.32

Protein Annotations

EnsemblPlants:TraesCS3A01G025000.1	EnsemblPlantsGene:TraesCS3A01G025000	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF9
PFAM:PF02458	SEG:seg	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3A:+:13363626..13365055

Molecular Weight (calculated)

30603.5 Da

IEP (calculated)

6.634

GRAVY (calculated)

0.115

Length

293 amino acids

Sequence
(BLAST)

001: MEGAEFVHAV APGVTVADVV VPLYTPVVVR SFFPLDGLLG VDAVAGSHPV LAAQATELTD GVFVAMSLNH GVGDGTSFWH LFNTWSEISR RQSDAAAISS
101: PLPLRAPIIG GSGAAGLLPP FLRGERKEAQ SEGERRGIRQ RQRHHLLVAG PAGAPVVAVC RARRLAPDHS TTYVLLVGSR GRLTDIPSGY AGNAVARAEA
201: TSTAGEILER GLGWAASLLN KMVASLDEAS ERDRLASWAL WRSSANKMDG TATVFEGRGG GGSMALEVCL NPEVLARLVA ADEFMSGVST ATA

Best Arabidopsis Sequence Match ( AT5G42830.1 )
(BLAST)

001: MDSSSSVKIV SKSFVKPKTL PEESKQPYYL SPWDYAMLSV QYIQKGLLFH KPPLDSIDTL LEKLKDSLAV TLVHFYPLAG RLSSLTTEKP KSYSVFVDCN
101: DSPGAGFIYA TSDLCIKDIV GAKYVPSIVQ SFFDHHKAVN HDGHTMSLLS VQVTELVDGI FIGLSMNHAM GDGTAFWKFF TAWSEIFQGQ ESNQNDDLCL
201: KNPPVLKRYI PEGYGPLFSL PYSHPDEFIR TYESPILKER MFCFSSETIR MLKTRVNQIC GTTSISSFQS LTAVIWRCIT RARRLPLDRE TSCRVAADNR
301: GRMYPPLHKD YFGNCLSALR TAAKAGELLE NDLGFAALKV HQAVAEHTSE KVSQMIDQWL KSPYIYHIDR LFEPMSVMMG SSPRFNKYGC EFGLGKGVTL
401: RSGYAHKFDG KVSAYPGREG GGSIDLEVCL VPEFMEALES DEEFMSLVSL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.