Factsheet for TraesCS3A01G024800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

extracellular 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, extracellular, plastid
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G050000.1	Wheat	mitochondrion, plastid	30.32	66.01
TraesCS2A01G042800.1	Wheat	cytosol	66.74	63.17
TraesCS2A01G467400.1	Wheat	cytosol	64.03	60.34
HORVU2Hr1G006540.2	Barley	mitochondrion	64.71	59.58
HORVU2Hr1G012940.1	Barley	cytosol	25.57	57.95
TraesCS3A01G025000.1	Wheat	cytosol	37.78	57.0
TraesCS4A01G350100.1	Wheat	cytosol	57.69	54.14
TraesCS2A01G035800.1	Wheat	cytosol	57.24	54.06
Zm00001d035064_P001	Maize	cytosol	58.6	53.18
TraesCS2A01G006700.1	Wheat	cytosol	50.91	51.96
KXG24241	Sorghum	cytosol	54.3	51.84
EES13245	Sorghum	cytosol	55.43	51.8
TraesCS2A01G035600.1	Wheat	cytosol	33.03	51.23
TraesCS1A01G008500.1	Wheat	cytosol, plastid	52.71	49.36
TraesCS1A01G286400.1	Wheat	cytosol	51.36	48.92
TraesCS1A01G029500.1	Wheat	peroxisome, plastid	51.81	48.52
TraesCS2A01G036200.1	Wheat	cytosol	54.98	47.65
TraesCS1A01G286500.1	Wheat	cytosol	47.06	47.38
TraesCS2A01G035900.1	Wheat	mitochondrion	56.11	46.27
TraesCS2A01G006200.1	Wheat	cytosol	52.71	44.89
TraesCS3A01G127300.1	Wheat	plastid	36.88	34.75
Zm00001d035057_P001	Maize	extracellular	57.92	34.55
TraesCS4A01G495900.1	Wheat	plastid	36.43	33.97
TraesCS7A01G002700.1	Wheat	plastid	35.75	33.26
TraesCS4A01G426400.1	Wheat	cytosol	26.24	32.77
TraesCS4A01G401500.1	Wheat	plastid	35.07	32.43
TraesCS1A01G341300.1	Wheat	golgi, unclear	30.54	30.2
TraesCS3A01G367900.1	Wheat	plastid	31.9	28.6
TraesCS1A01G278800.1	Wheat	cytosol, plastid	31.67	26.52

Protein Annotations

EnsemblPlants:TraesCS3A01G024800.1	EnsemblPlantsGene:TraesCS3A01G024800	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF9
PFAM:PF02458	SEG:seg	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3A:-:13334117..13335765

Molecular Weight (calculated)

46641.8 Da

IEP (calculated)

6.434

GRAVY (calculated)

0.092

Length

442 amino acids

Sequence
(BLAST)

001: MDPFQIMSRR MVLPEQTTAW LPPALETTVD LTSWDLRMIT LEYIQMGVLL PKPPSPTTGR GGQGHHAHVA ERLASSLARA LGRYYPYAGR LAVALGGDGG
101: STSIAVSLRC SREGTELVHA VAPGVTVADV VAPLCTPGVV QSFFPLNGLV SVDAAAGSHP LPAAQVTELA DGVFVTMSLN HASDGAAISS TLPVHRRWFL
201: DGCRVPMPFR KLEDIVGHEH SSSVQQQECF LHFSGESVRK LKEKANAEAA GTGSVGATIS SLQALLAHLW IAVCRARRLA PDQSTTYALL IGCRGRVDGV
301: SAGNAVVRVE VGSTAGEILK LGLGWTASLL NRMVASFDEA SERDRLASWP RNPSFACVSP PPAALVVTGN SPRFDVYGDD FWWGRPVGVR SGPTSKMDGT
401: ATVFEGGGGI GSMALEACLD PEALVRLVAD EGFMSTVSAA TE

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.