Factsheet for TraesCS2D01G050000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G331800.1	Wheat	cytosol	58.62	36.62
TraesCS2D01G041900.1	Wheat	cytosol	69.95	30.41
TraesCS3A01G024800.1	Wheat	cytosol, extracellular, plastid	66.01	30.32
TraesCS5D01G519200.1	Wheat	cytosol	62.56	27.67
HORVU2Hr1G006540.2	Barley	mitochondrion	64.04	27.08
TraesCS2D01G467400.1	Wheat	cytosol	62.07	26.87
TraesCS5D01G521700.1	Wheat	cytosol, mitochondrion, plastid	61.08	26.38
TraesCS2D01G035000.1	Wheat	cytosol	59.11	25.7
TraesCS4D01G331600.1	Wheat	cytosol, peroxisome, plastid	58.13	25.49
EES13245	Sorghum	cytosol	58.62	25.16
Zm00001d035064_P001	Maize	cytosol	60.1	25.05
TraesCS7D01G316600.1	Wheat	cytosol	56.16	24.57
TraesCS2D01G556300.1	Wheat	cytosol	54.19	24.23
KXG24241	Sorghum	cytosol	55.17	24.19
TraesCS4D01G331500.1	Wheat	cytosol	52.71	24.04
TraesCS4D01G331700.1	Wheat	cytosol	52.22	23.93
TraesCS2D01G576900.1	Wheat	cytosol	52.22	23.77
TraesCS1D01G029700.2	Wheat	peroxisome	55.17	23.53
TraesCS1D01G285500.1	Wheat	cytosol	52.71	23.16
TraesCS3D01G545200.1	Wheat	plastid	50.74	21.91
TraesCS2D01G035200.1	Wheat	cytosol, peroxisome, plastid	53.2	21.14
TraesCS3D01G128500.1	Wheat	mitochondrion	38.92	16.84
Zm00001d035057_P001	Maize	extracellular	59.61	16.33
TraesCS7D01G531500.1	Wheat	mitochondrion	37.93	16.21
TraesCS7D01G003400.1	Wheat	plastid	35.96	15.53
TraesCS7D01G057300.1	Wheat	mitochondrion	35.96	15.53
TraesCS3D01G360900.1	Wheat	plastid	37.44	15.42
TraesCS1D01G343400.1	Wheat	golgi	33.0	14.99
TraesCS3D01G395300.1	Wheat	cytosol	32.51	14.29
HORVU2Hr1G012940.1	Barley	cytosol	13.3	13.85
TraesCS1D01G278100.1	Wheat	plastid	37.44	13.31
TraesCS3D01G021100.1	Wheat	cytosol	14.78	9.55

Protein Annotations

EnsemblPlants:TraesCS2D01G050000.1	EnsemblPlantsGene:TraesCS2D01G050000	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF9
PFAM:PF02458	SEG:seg	SignalP:SignalP-noTM	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:+:18326429..18327040

Molecular Weight (calculated)

21515.5 Da

IEP (calculated)

8.490

GRAVY (calculated)

-0.041

Length

203 amino acids

Sequence
(BLAST)

001: MSRSGSGSGN TTISSLQALL AHLWIAVCRA RRLAPDQRTV YALVVGFRGR VHGLPVDYMG NAVARAEAVS TADEILKGGL GWAASLLNRL VVSSDEATER
101: DRHASWIQTP SFAGVSARPT AAALVVTGGT RWFDVYGNDF GWGRPVGVRT GSANKTDGTA TVYEGRGGGG SMDLEVCLAP EVLARLVADE EFMSTVRKLD
201: RSC

Best Arabidopsis Sequence Match ( AT5G01210.1 )
(BLAST)

001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC

Arabidopsis Description

AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.