Factsheet for TraesCS1D01G343400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G354000.1	Wheat	cytosol	97.99	98.21
TraesCS1A01G341300.1	Wheat	golgi, unclear	97.76	97.76
HORVU1Hr1G075900.1	Barley	cytosol	96.2	95.77
Zm00001d031893_P001	Maize	mitochondrion	82.33	82.88
Os08t0562500-01	Rice	plastid	80.54	80.9
EES14067	Sorghum	cytosol, peroxisome, plastid	82.55	79.02
GSMUA_AchrUn_...	Banana	cytosol	66.22	66.37
PGSC0003DMT400026230	Potato	cytosol	47.2	52.36
VIT_16s0050g00830.t01	Wine grape	cytosol	51.68	51.91
KRH08886	Soybean	cytosol, nucleus	50.78	50.56
KRH38407	Soybean	cytosol	50.56	50.45
Solyc03g025320.2.1	Tomato	cytosol, nucleus	50.56	50.0
CDY44265	Canola	cytosol	51.01	48.51
Bra009716.1-P	Field mustard	cytosol	49.66	48.05
Bra029388.1-P	Field mustard	cytosol	51.01	47.9
CDX80398	Canola	cytosol	49.22	47.41
CDX88059	Canola	cytosol	49.66	47.23
AT5G23940.1	Thale cress	mitochondrion	50.11	46.28
VIT_16s0050g00870.t01	Wine grape	cytosol	51.9	39.12
TraesCS7D01G057300.1	Wheat	mitochondrion	35.79	34.04
TraesCS7D01G316600.1	Wheat	cytosol	34.45	33.19
TraesCS2D01G050000.1	Wheat	mitochondrion, plastid	14.99	33.0
TraesCS2D01G467400.1	Wheat	cytosol	34.0	32.41
TraesCS7D01G003400.1	Wheat	plastid	33.78	32.13
TraesCS3D01G128500.1	Wheat	mitochondrion	33.56	31.98
TraesCS7D01G531500.1	Wheat	mitochondrion	33.78	31.79
TraesCS5D01G521700.1	Wheat	cytosol, mitochondrion, plastid	32.89	31.28
TraesCS2D01G041900.1	Wheat	cytosol	32.66	31.26
TraesCS4D01G331800.1	Wheat	cytosol	22.37	30.77
TraesCS2D01G035000.1	Wheat	cytosol	31.77	30.41
TraesCS5D01G519200.1	Wheat	cytosol	31.1	30.28
TraesCS1D01G285500.1	Wheat	cytosol	31.1	30.09
TraesCS2D01G576900.1	Wheat	cytosol	29.98	30.04
TraesCS4D01G331600.1	Wheat	cytosol, peroxisome, plastid	31.1	30.02
TraesCS3D01G360900.1	Wheat	plastid	32.66	29.61
TraesCS2D01G556300.1	Wheat	cytosol	29.75	29.3
TraesCS4D01G331500.1	Wheat	cytosol	29.08	29.21
TraesCS1D01G029700.2	Wheat	peroxisome	30.87	28.99
TraesCS4D01G331700.1	Wheat	cytosol	28.19	28.44
TraesCS3D01G021100.1	Wheat	cytosol	19.69	28.03
TraesCS2D01G035200.1	Wheat	cytosol, peroxisome, plastid	31.99	27.98
TraesCS3D01G545200.1	Wheat	plastid	28.86	27.45
TraesCS1D01G278100.1	Wheat	plastid	34.0	26.62
TraesCS3D01G395300.1	Wheat	cytosol	25.5	24.68

Protein Annotations

MapMan:21.9.5.3	Gene3D:3.30.559.10	InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009987	GO:GO:0010090	GO:GO:0010143	GO:GO:0016043	GO:GO:0016740
GO:GO:0016747	GO:GO:0030154	GO:GO:0051179	GO:GO:0090626	InterPro:IPR023213	PFAM:PF02458
PANTHER:PTHR31896	PANTHER:PTHR31896:SF4	EnsemblPlantsGene:TraesCS1D01G343400	EnsemblPlants:TraesCS1D01G343400.1	InterPro:Transferase	SEG:seg

Description

No Description!

Coordinates

chr1D:+:432406097..432409460

Molecular Weight (calculated)

47574.8 Da

IEP (calculated)

5.496

GRAVY (calculated)

-0.041

Length

447 amino acids

Sequence
(BLAST)

001: MAVDNGDAAA MAVAVTGTRT VAPAKTRVTL ATFDLPYITF YYNQKLLLYR LPQGAGDFQD VTARMADALG GALAYFYPLA GRIRQEKGDG GALYVDGEEG
101: AEVVEAAAEG VSVDQLAGED CGEEAEKLMQ QLIPYTGVMN LEGLRRPLLA VQFTKLKDGI AVGCAFNHAV LDGTATWHFM SSWAELCRGA AAPSALPIHN
201: RAMARSVRVG LTLPASAEAH EKTDPNGPKK PLVARVFSFP EPVVARIKAA ANAALPPGAK PFSAFQSLGA HIWRSVSRAR ELGPADITVF AVFADCRSRL
301: DPPVPATYFG NLIQAVFTGV PAGMLLGGPP ELAAGMLQKA IGEHDAAAVT RRLDEYEAAP KLFHYSDAGP NCVAVGSSPR FRVYDVDFGF GRPERVRSGG
401: NNKFDGMVYL YPGRGGDSGG IDVELALQPE PMQRLEKDEE FLQVAAA

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.