Factsheet for TraesCS3D01G360900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G367900.1	Wheat	plastid	97.36	97.36
TraesCS3B01G399600.1	Wheat	plastid	96.75	96.95
HORVU3Hr1G085100.2	Barley	plastid	95.94	88.58
Os01t0854000-01	Rice	plastid	81.95	83.64
EES01771	Sorghum	plastid	83.16	82.83
Zm00001d042826_P001	Maize	plastid	80.12	81.61
Zm00001d012333_P001	Maize	plastid	81.74	79.02
GSMUA_Achr10P...	Banana	plastid	53.75	63.25
GSMUA_Achr8P19570_001	Banana	plastid	53.75	62.8
TraesCS1D01G278100.1	Wheat	plastid	70.79	61.12
GSMUA_AchrUn_...	Banana	plastid	48.48	57.59
CDY07045	Canola	peroxisome	50.91	55.78
CDX74815	Canola	cytosol, plastid	49.09	55.76
CDX93218	Canola	peroxisome	50.51	55.21
Bra009632.1-P	Field mustard	plastid	45.44	54.11
KRH73150	Soybean	cytosol, plastid	52.33	53.97
CDY40314	Canola	cytosol	49.9	53.95
Bra017041.1-P	Field mustard	cytosol	51.32	53.83
AT5G01210.1	Thale cress	cytosol	51.52	53.47
Solyc05g052680.1.1	Tomato	cytosol, plastid	49.49	53.39
PGSC0003DMT400069898	Potato	cytosol	49.49	53.39
CDY24938	Canola	cytosol, plastid	49.7	53.38
PGSC0003DMT400069755	Potato	cytosol, plastid	49.9	53.13
PGSC0003DMT400069897	Potato	plastid	49.49	53.04
KRH14988	Soybean	cytosol, plastid	51.32	52.82
Bra004996.1-P	Field mustard	cytosol	51.12	52.61
Bra028893.1-P	Field mustard	cytosol, plastid	51.12	52.61
KRH66032	Soybean	cytosol	49.7	52.46
Solyc05g052670.1.1	Tomato	plastid	48.88	52.28
PGSC0003DMT400052409	Potato	cytosol, plastid	48.68	52.17
AT2G39980.1	Thale cress	cytosol, plastid	50.91	52.07
Solyc09g014280.1.1	Tomato	cytosol, plastid	48.28	51.74
KRH75833	Soybean	cytosol	49.7	51.69
VIT_08s0007g01930.t01	Wine grape	plastid	50.91	50.81
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	49.29	49.9
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	50.71	49.51
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	50.71	49.21
KRG97771	Soybean	plastid	46.65	48.63
KRH31113	Soybean	plastid	47.06	47.06
TraesCS7D01G057300.1	Wheat	mitochondrion	35.9	37.66
TraesCS7D01G003400.1	Wheat	plastid	35.9	37.66
TraesCS2D01G050000.1	Wheat	mitochondrion, plastid	15.42	37.44
TraesCS3D01G128500.1	Wheat	mitochondrion	35.29	37.1
TraesCS2D01G467400.1	Wheat	cytosol	34.08	35.82
TraesCS7D01G531500.1	Wheat	mitochondrion	34.48	35.79
TraesCS5D01G519200.1	Wheat	cytosol	33.06	35.51
TraesCS1D01G285500.1	Wheat	cytosol	32.86	35.06
TraesCS5D01G521700.1	Wheat	cytosol, mitochondrion, plastid	33.06	34.68
TraesCS7D01G316600.1	Wheat	cytosol	32.45	34.48
TraesCS2D01G556300.1	Wheat	cytosol	31.03	33.7
TraesCS4D01G331800.1	Wheat	cytosol	21.91	33.23
TraesCS2D01G576900.1	Wheat	cytosol	30.02	33.18
TraesCS2D01G041900.1	Wheat	cytosol	31.24	32.98
TraesCS1D01G343400.1	Wheat	golgi	29.61	32.66
TraesCS1D01G029700.2	Wheat	peroxisome	31.44	32.56
TraesCS4D01G331600.1	Wheat	cytosol, peroxisome, plastid	30.43	32.4
TraesCS2D01G035000.1	Wheat	cytosol	30.43	32.12
TraesCS4D01G331500.1	Wheat	cytosol	28.8	31.91
TraesCS3D01G545200.1	Wheat	plastid	30.02	31.49
TraesCS4D01G331700.1	Wheat	cytosol	28.19	31.38
TraesCS3D01G021100.1	Wheat	cytosol	18.86	29.62
TraesCS2D01G035200.1	Wheat	cytosol, peroxisome, plastid	30.02	28.96
TraesCS3D01G395300.1	Wheat	cytosol	24.75	26.41

Protein Annotations

EnsemblPlants:TraesCS3D01G360900.1	EnsemblPlantsGene:TraesCS3D01G360900	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF23
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr3D:+:474450707..474452188

Molecular Weight (calculated)

52987.4 Da

IEP (calculated)

7.765

GRAVY (calculated)

0.014

Length

493 amino acids

Sequence
(BLAST)

001: MAQMLSAMTM MDTVPTAPAI MPAQPICLDA PVSGSGIAVL SRQAVRPDGP PSAIGDLTLS VSDLPMLSCH YIQKGLFFPA PDVPMASLVS LLVSSLSRAL
101: AVFPALAGRF VTLPDDRIVI RCNDAGVEFH HAVAPALSLN DFLVPNADVP TRLTKDLFPM DRTVSYEGHR RPLTSFQLTV LGDGAVFIGV VANHAVVDGT
201: SFWHFYNTWA ALCRGASPRL PDFRRNFFGE STAVLRFAGG VGPAVTFDAD APLRERIFHF SRDSIRELKA MANRRSSAGQ DAEVYGKMAH DPNKNQEARG
301: EISSFQSLCA QIWISTTRAR KQLDADATTT LRLAVNCRHR LRPAISPAYF GNAIQSAPTT ATVAELASNG LRWAASKLHA SLAAYGDEAI RGAAAAWQAA
401: PRCFPLGNPD GAVVTMGSSN RFPMYEGNDF GWGRPLAVRS GRANKFDGKM SAFPGRSGDG SVDIEVCLAP DTMAALLRDD EFMQYVSCPA HLL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.