Factsheet for Zm00001d042826_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01771	Sorghum	plastid	95.25	93.13
Os01t0854000-01	Rice	plastid	84.09	84.27
Zm00001d012333_P001	Maize	plastid	88.22	83.73
TraesCS3A01G367900.1	Wheat	plastid	81.82	80.32
TraesCS3D01G360900.1	Wheat	plastid	81.61	80.12
TraesCS3B01G399600.1	Wheat	plastid	81.2	79.88
HORVU3Hr1G085100.2	Barley	plastid	82.02	74.34
Zm00001d010079_P001	Maize	plastid	69.63	67.67
GSMUA_Achr10P...	Banana	plastid	52.69	60.86
GSMUA_Achr8P19570_001	Banana	plastid	51.86	59.48
CDX74815	Canola	cytosol, plastid	50.21	55.99
GSMUA_AchrUn_...	Banana	plastid	47.52	55.42
CDY07045	Canola	peroxisome	51.24	55.11
CDY40314	Canola	cytosol	51.65	54.82
CDX93218	Canola	peroxisome	50.83	54.55
AT5G01210.1	Thale cress	cytosol	53.51	54.53
KRH73150	Soybean	cytosol, plastid	53.72	54.39
Bra009632.1-P	Field mustard	plastid	46.49	54.35
Bra028893.1-P	Field mustard	cytosol, plastid	53.31	53.86
Solyc05g052680.1.1	Tomato	cytosol, plastid	50.83	53.83
PGSC0003DMT400069898	Potato	cytosol	50.62	53.61
PGSC0003DMT400069755	Potato	cytosol, plastid	51.24	53.56
KRH14988	Soybean	cytosol, plastid	52.89	53.44
CDY24938	Canola	cytosol, plastid	50.62	53.38
KRH66032	Soybean	cytosol	51.45	53.32
PGSC0003DMT400069897	Potato	plastid	50.62	53.26
Bra017041.1-P	Field mustard	cytosol	51.65	53.19
Solyc05g052670.1.1	Tomato	plastid	50.62	53.15
Bra004996.1-P	Field mustard	cytosol	52.27	52.82
PGSC0003DMT400052409	Potato	cytosol, plastid	50.0	52.61
KRH75833	Soybean	cytosol	51.24	52.32
Solyc09g014280.1.1	Tomato	cytosol, plastid	49.59	52.17
AT2G39980.1	Thale cress	cytosol, plastid	51.86	52.07
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	53.31	51.09
VIT_08s0007g01930.t01	Wine grape	plastid	52.07	51.01
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	53.1	50.59
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	50.83	50.51
KRG97771	Soybean	plastid	48.55	49.68
KRH31113	Soybean	plastid	48.76	47.87
Zm00001d035865_P001	Maize	mitochondrion	36.98	37.68
Zm00001d035064_P001	Maize	cytosol	35.74	35.52
Zm00001d049704_P001	Maize	cytosol, mitochondrion, peroxisome	33.68	33.96
Zm00001d031893_P001	Maize	mitochondrion	30.79	33.56
Zm00001d035057_P001	Maize	extracellular	35.95	23.48

Protein Annotations

EnsemblPlants:Zm00001d042826_P001	EnsemblPlants:Zm00001d042826_T001	EnsemblPlantsGene:Zm00001d042826	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF23	PFAM:PF02458	ProteinID:ONM36360.1	SEG:seg	SUPFAM:SSF52777	UniParc:UPI000844E4EA
UniProt:A0A1D6N6Z5	MapMan:50.2.3	:	:	:	:

Description

AER

Coordinates

chr3:-:181230771..181232225

Molecular Weight (calculated)

52029.4 Da

IEP (calculated)

8.167

GRAVY (calculated)

0.028

Length

484 amino acids

Sequence
(BLAST)

001: MPMLDAAPAS SAIMPKLPAA ACLDAPPSGI TVVSRQHVRP DAASAVGDLT LSVSDLPMLS CHYIQKGLFF PAPDLPMSSV VSLLLSSLSR ALAVVPALAG
101: RFVTLPDDRI VIRCNDAGVD FLHAVAPGLS LDDFLVPDAD VPTKHTKDLF PMDRTVSYEG HRRPLTSFQV TALGDGTVFI GIVANHAVVD GTSFWQFFNT
201: WAAICRGESP KLPDFRRSFF GESTAVLRFP GGVGPSVTFD VDAPLRERVF HFSADAIREL KAIANRRPSG GQDAEVYGKM AQDPKNPQVR GEISSFQSLC
301: AQIWLSVTRA RKRLAPDATT TFRMAVNCRH RLQPPISPVY FGNAIQSAAT MATVSELARS DLRWAAGKLN ATLAAYGDGT IRRAAAAWQA APRCFPLGNP
401: DGSVITMGSS NRFPMYVGND FGWGRPLAVR SGRANKFDGK MSAFPGRAGD GSVDIEVCLP PETMAALLHD AEFMHYVSCP SHLL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.