CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93218	Canola	peroxisome	94.0	93.79
Bra017041.1-P	Field mustard	cytosol	97.56	93.4
CDX74815	Canola	cytosol, plastid	82.67	85.71
CDY24938	Canola	cytosol, plastid	83.78	82.14
AT2G39980.1	Thale cress	cytosol, plastid	84.22	78.63
PGSC0003DMT400069755	Potato	cytosol, plastid	66.89	65.01
PGSC0003DMT400069898	Potato	cytosol	66.0	64.99
Solyc05g052670.1.1	Tomato	plastid	66.22	64.64
Solyc05g052680.1.1	Tomato	cytosol, plastid	65.56	64.55
PGSC0003DMT400069897	Potato	plastid	65.78	64.35
CDY40314	Canola	cytosol	62.0	61.18
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	65.11	60.16
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	64.67	57.62
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	64.0	56.69
GSMUA_Achr10P...	Banana	plastid	51.78	55.61
KRG97771	Soybean	plastid	57.11	54.33
GSMUA_Achr8P19570_001	Banana	plastid	50.67	54.03
KRH31113	Soybean	plastid	57.78	52.74
GSMUA_AchrUn_...	Banana	plastid	48.44	52.53
Os01t0854000-01	Rice	plastid	55.11	51.35
Zm00001d042826_P001	Maize	plastid	55.11	51.24
TraesCS3A01G367900.1	Wheat	plastid	56.0	51.12
EES01771	Sorghum	plastid	56.22	51.11
TraesCS3D01G360900.1	Wheat	plastid	55.78	50.91
TraesCS3B01G399600.1	Wheat	plastid	55.56	50.81
Os05t0449200-01	Rice	plastid	52.89	49.58
Zm00001d012333_P001	Maize	plastid	55.78	49.22
Zm00001d010079_P001	Maize	plastid	53.78	48.59
HORVU3Hr1G085100.2	Barley	plastid	56.22	47.38
EES19625	Sorghum	plastid	54.0	47.18
TraesCS1A01G278800.1	Wheat	cytosol, plastid	53.33	45.45
TraesCS1B01G287800.1	Wheat	cytosol, plastid	52.89	45.16
CDY17759	Canola	cytosol	7.78	43.75
HORVU1Hr1G073330.1	Barley	cytosol	52.89	42.73
TraesCS1D01G278100.1	Wheat	plastid	53.11	41.86
CDY14025	Canola	extracellular	14.0	41.45
CDY40772	Canola	cytosol, nucleus, plastid	37.78	41.16
CDY14027	Canola	cytosol, nucleus, plastid	37.33	40.88
CDX71519	Canola	cytosol, nucleus, plastid	39.56	39.64
CDY02424	Canola	cytosol	39.11	39.2
CDY21238	Canola	cytosol	39.11	39.2
CDX81073	Canola	cytosol	37.78	36.88
CDX78313	Canola	cytosol	38.44	36.73
CDX81074	Canola	plastid	37.11	36.3
CDY40771	Canola	cytosol	36.89	34.23
CDY18724	Canola	cytosol	31.78	33.49
CDX97348	Canola	cytosol	17.56	33.19
CDX83118	Canola	mitochondrion, plastid	32.22	32.29
CDY07540	Canola	cytosol	32.0	32.29
CDY61372	Canola	cytosol	17.33	32.23
CDY01434	Canola	cytosol	31.78	32.13
CDY04024	Canola	cytosol	11.33	32.08
CDY14026	Canola	cytosol	18.22	32.03
CDX77413	Canola	cytosol, plastid	22.67	31.88
CDX74510	Canola	cytosol	31.56	31.7
CDX68582	Canola	mitochondrion	10.22	31.29
CDY39539	Canola	cytosol, plastid	31.11	30.97
CDY47247	Canola	plasma membrane	25.33	30.89
CDY40431	Canola	cytosol	30.89	30.89
CDY12811	Canola	extracellular	32.22	30.66
CDX80398	Canola	cytosol	31.56	30.6
CDX83119	Canola	cytosol	12.22	30.39
CDY32573	Canola	cytosol	25.11	30.38
CDY47454	Canola	cytosol	30.67	30.13
CDX88059	Canola	cytosol	31.33	30.0
CDY44265	Canola	cytosol	30.89	29.57
CDY30596	Canola	extracellular	17.56	29.48
CDY18638	Canola	cytosol	29.56	29.42
CDY01691	Canola	plastid	28.44	29.29
CDX81339	Canola	cytosol	28.89	28.76
CDX74540	Canola	cytosol	25.78	28.64
CDY01433	Canola	cytosol	27.11	27.92
CDY12812	Canola	cytosol	17.78	27.68
CDY66079	Canola	cytosol	6.67	16.48

Protein Annotations

EnsemblPlants:CDY07045	EnsemblPlantsGene:GSBRNA2T00123362001	Gene3D:3.30.559.10	GO:A0A078EY79	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF11	PFAM:PF02458	ProteinID:CDY07045	ProteinID:CDY07045.1	SEG:seg	SUPFAM:SSF52777
UniParc:UPI0004EE8181	MapMan:50.2.3	:	:	:	:

Description

BnaA04g22700D

Coordinates

chrLK031974:-:821254..822666

Molecular Weight (calculated)

49392.7 Da

IEP (calculated)

6.901

GRAVY (calculated)

-0.189

Length

450 amino acids

Sequence
(BLAST)

001: MPSLENSVTV ISTNKVFPDK KSTLADLKLS VSDLPMLSCH YIQKGCLFTR PHLTPHELLS HLEHSLSLTL SHFPPLAGRL STSEDGHVFL SCNDAGADIV
101: FAEAKYVRVG DVMAGVDVPG VVKEFFSYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVVDGTSLW NFVNTFAEVS RGAENATRQP DFTRESVLIS
201: PAVLKVPRGG PKVTFDENAP LRERIFSFTR EQILELKAMV NGERNGVEVL GKQSNDKLNE SKLVISSFQS LCALLWRAIT RARNLPSAKT TTFRMAVNVR
301: HRLSPKLNPE YFGNAIQSVP TFATAGEVLS RDIRWTADQL NRSVAAHGDE RTREVVADWE ANPRCFPLGN ADGASVTMGS SPRFPMYEND FGWGKPVAVR
401: SGRANKFDGK ISAFPGRDGN GSVDLEVVIA PETMAGIECD GEFMRYVSKV

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.