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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • peroxisome 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:peroxisome
Predotar:secretory
PProwler:peroxisome
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033050.1-P Field mustard extracellular, golgi 97.29 99.45
CDY07540 Canola cytosol 66.67 55.16
CDY17759 Canola cytosol 11.65 53.75
CDY47454 Canola cytosol 65.58 52.84
CDX74510 Canola cytosol 63.14 52.01
CDY18724 Canola cytosol 59.62 51.52
CDY30596 Canola extracellular 37.4 51.49
CDY40431 Canola cytosol 62.6 51.33
CDY01434 Canola cytosol 59.62 49.44
CDY12811 Canola extracellular 59.62 46.51
CDY12812 Canola cytosol 36.31 46.37
CDY32573 Canola cytosol 45.26 44.89
CDX83118 Canola mitochondrion, plastid 47.15 38.75
CDY39539 Canola cytosol, plastid 45.8 37.39
CDY01691 Canola plastid 43.09 36.38
CDX81339 Canola cytosol 43.36 35.4
CDY18638 Canola cytosol 43.09 35.18
CDY01433 Canola cytosol 40.65 34.32
CDX77413 Canola cytosol, plastid 29.0 33.44
CDX74540 Canola cytosol 36.31 33.09
CDX83119 Canola cytosol 14.63 29.83
CDY14025 Canola extracellular 12.2 29.61
CDY02424 Canola cytosol 34.42 28.29
CDY21238 Canola cytosol 34.42 28.29
CDX71519 Canola cytosol, nucleus, plastid 33.6 27.62
CDX74815 Canola cytosol, plastid 30.08 25.58
CDY07045 Canola peroxisome 30.89 25.33
CDY14027 Canola cytosol, nucleus, plastid 28.18 25.3
CDY40314 Canola cytosol 31.17 25.22
CDY40772 Canola cytosol, nucleus, plastid 28.18 25.18
CDX81074 Canola plastid 31.17 25.0
CDX81073 Canola cytosol 31.17 24.95
CDX93218 Canola peroxisome 30.35 24.83
CDX78313 Canola cytosol 31.44 24.63
CDY24938 Canola cytosol, plastid 29.81 23.97
CDX80398 Canola cytosol 29.54 23.49
CDY44265 Canola cytosol 29.81 23.4
CDX88059 Canola cytosol 29.54 23.19
CDY55902 Canola endoplasmic reticulum, nucleus, peroxisome 30.89 22.44
CDY48117 Canola endoplasmic reticulum, nucleus, peroxisome 30.62 22.38
CDY04024 Canola cytosol 9.49 22.01
CDY40771 Canola cytosol 28.46 21.65
CDX97348 Canola cytosol 12.2 18.91
CDY14026 Canola cytosol 12.74 18.36
CDY61372 Canola cytosol 11.92 18.18
CDY66079 Canola cytosol 4.88 9.89
CDX68582 Canola mitochondrion 3.52 8.84
Protein Annotations
EnsemblPlants:CDY47247EnsemblPlantsGene:GSBRNA2T00086967001Gene3D:3.30.559.10GO:A0A078IAR4GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016747InterPro:CAT-like_dom_sf
InterPro:IPR023213InterPro:TransferasePANTHER:PTHR31896PFAM:PF02458ProteinID:CDY47247ProteinID:CDY47247.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EF07E9UniProt:A0A078IAR4MapMan:50.2.3:
Description
BnaA02g29330DBnaA02g29330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAR4]
Coordinates
chrLK032704:+:103457..105610
Molecular Weight (calculated)
41761.0 Da
IEP (calculated)
9.438
GRAVY (calculated)
0.014
Length
369 amino acids
Sequence
(BLAST)
001: MLETVAIWGK MVSSIMLIWA MYSQYIPRHI RSQMEIYFYK LLGWLSFYVH INLEGVTGSL LALQVTELKD GVLIGYGINH LVSDGASFWS FFKTWTEICS
101: AARKTFPPLP LRGWFLPEID YPIRIPISET VPSSPVRVVA SSSLLYLRKK MFRFTRRHIS ELKAKANAEV AAAAYGEHLK ISSFQAVLAH MWRSIIRNSD
201: LDPEEVIHFK LPMDLRQRLN PPLQKECFGN MVGLPTAITT AGEMLDNGLG WAALQLDKTV RSQTNEELKR FAEDWVKNPK IPNGLMLNNS FLVGSSPRFN
301: VFGNDFGWGK PIAVRAGPGI SGHGRILVYP GTEQRSMEIQ TCLWSHVLDK LLADAEFLQH VLCVHPSRL
Best Arabidopsis Sequence Match ( AT3G50270.1 )
(BLAST)
001: MAGGGVVLVS SSIVRPVNSS QSGRTKIHLT PFDLSLLQFD YPQRGLLFSK PDSDFHLIIS RLKDSLSLAL EIYFPFAGRL VKTENLEDDT VSFFIDCDGS
101: GARFLHTEAK SVSVSDILQP DGSVPDFLKY FFPADDFKSC DGVSLPLLVI QVTEMKDGVF ISFCYNHMVA DGVSMWSFFD TWSKICSTGS CFNYKPLVLK
201: GWFLEGIDYP IHVPVSEAER SPPSREPSSV PITKEWIFHF TKKNISDLKA KANSEIASSS DLEVSSLQAV SAHMWRSIIR HSGVSREQKT HCRLVVDLRQ
301: RVNPPLEKDC FGNMVYLSSA ITTVEELLDR GLGEAALQIR KLVSSQTNET CKSFAEDWVR NIKNLNSGIG SKVGNTIVIA SSPRFEVYNK DFGWGKPIAI
401: RAGPSNSING KLSVFQGISE GSIDVQAILW GDVIVKLLAD LEFLEHVTIA
Arabidopsis Description
Anthranilate N-hydroxycinnamoyl/benzoyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SNE0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.