CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029388.1-P	Field mustard	cytosol	97.66	96.43
CDX88059	Canola	cytosol	88.72	88.72
CDX80398	Canola	cytosol	87.02	88.15
AT5G23940.1	Thale cress	mitochondrion	86.81	84.3
KRH08886	Soybean	cytosol, nucleus	64.04	67.04
KRH38407	Soybean	cytosol	63.4	66.52
PGSC0003DMT400026230	Potato	cytosol	56.17	65.51
VIT_16s0050g00830.t01	Wine grape	cytosol	61.06	64.49
Solyc03g025320.2.1	Tomato	cytosol, nucleus	61.28	63.72
GSMUA_AchrUn_...	Banana	cytosol	52.77	55.61
TraesCS1A01G341300.1	Wheat	golgi, unclear	48.94	51.45
TraesCS1B01G354000.1	Wheat	cytosol	48.51	51.12
TraesCS1D01G343400.1	Wheat	golgi	48.51	51.01
HORVU1Hr1G075900.1	Barley	cytosol	48.72	51.0
Zm00001d031893_P001	Maize	mitochondrion	47.87	50.68
Os08t0562500-01	Rice	plastid	46.6	49.21
EES14067	Sorghum	cytosol, peroxisome, plastid	48.3	48.61
VIT_16s0050g00870.t01	Wine grape	cytosol	60.0	47.55
CDY17759	Canola	cytosol	7.02	41.25
CDY02424	Canola	cytosol	31.06	32.52
CDY04024	Canola	cytosol	10.85	32.08
CDY21238	Canola	cytosol	30.64	32.07
CDX83118	Canola	mitochondrion, plastid	30.21	31.63
CDY14025	Canola	extracellular	10.21	31.58
CDY40314	Canola	cytosol	30.43	31.36
CDX83119	Canola	cytosol	11.91	30.94
CDY07045	Canola	peroxisome	29.57	30.89
CDX93218	Canola	peroxisome	29.36	30.6
CDY40772	Canola	cytosol, nucleus, plastid	26.81	30.51
CDY01434	Canola	cytosol	28.72	30.34
CDY14027	Canola	cytosol, nucleus, plastid	26.38	30.17
CDY07540	Canola	cytosol	28.51	30.04
CDX74815	Canola	cytosol, plastid	27.66	29.95
CDX71519	Canola	cytosol, nucleus, plastid	28.51	29.84
CDY47247	Canola	plasma membrane	23.4	29.81
CDX81074	Canola	plastid	28.94	29.57
CDY18724	Canola	cytosol	26.81	29.51
CDY24938	Canola	cytosol, plastid	28.72	29.41
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	31.06	28.91
CDY01691	Canola	plastid	26.81	28.83
CDY32573	Canola	cytosol	22.77	28.76
CDY40431	Canola	cytosol	27.45	28.67
CDX81073	Canola	cytosol	28.09	28.63
CDX74510	Canola	cytosol	27.23	28.57
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	30.64	28.35
CDY12811	Canola	extracellular	28.51	28.33
CDX78313	Canola	cytosol	28.09	28.03
CDY30596	Canola	extracellular	15.96	27.99
CDX81339	Canola	cytosol	26.81	27.88
CDY47454	Canola	cytosol	26.81	27.51
CDY12812	Canola	cytosol	16.81	27.34
CDY18638	Canola	cytosol	26.17	27.21
CDY01433	Canola	cytosol	25.11	27.0
CDY40771	Canola	cytosol	27.66	26.8
CDX74540	Canola	cytosol	22.77	26.42
CDY39539	Canola	cytosol, plastid	25.32	26.33
CDX68582	Canola	mitochondrion	8.09	25.85
CDX77413	Canola	cytosol, plastid	17.45	25.62
CDY14026	Canola	cytosol	13.83	25.39
CDY61372	Canola	cytosol	10.0	19.42
CDX97348	Canola	cytosol	9.79	19.33
CDY66079	Canola	cytosol	4.26	10.99

Protein Annotations

EnsemblPlants:CDY44265	EnsemblPlantsGene:GSBRNA2T00079776001	Gene3D:3.30.559.10	GO:A0A078I072	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF4	PFAM:PF02458	ProteinID:CDY44265	ProteinID:CDY44265.1	SEG:seg	UniParc:UPI0004EB033A
UniProt:A0A078I072	MapMan:21.9.5.3	:	:	:	:

Description

BnaC02g41520DBnaC02g41520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I072]

Coordinates

chrLK032584:-:27690..30625

Molecular Weight (calculated)

51976.6 Da

IEP (calculated)

5.166

GRAVY (calculated)

-0.293

Length

470 amino acids

Sequence
(BLAST)

001: MKIKISCKTH VQPNKPILGK KQFQLTTFDL PYLAFYYNQK FLLYKFENLL DLEETTFQNN VVEKLKDGLG SVLEDFYQLA GKLAKDEDGV FRVEYDADDE
101: EINGVEFSVA DAVDVSVDDL TAEEGTAQFK ELVPYNGILN LEGLRRPLLA VQVTKLKDGL AMGLAFNHAV LDGTATWHFM SSWAEICRGA ETISTQPFLD
201: RAKARDTRVK LDLASPKDPN ASSNGDAAAE PPQIVEKVFK FSDSAIHTIK SRANSVVPSD GSKPFSTFQS LTSHIWRHVT LARGLKPEDI TVFTVFADCR
301: RRIDPPMPEE YFGNMIQAIF TGTAAGLLAA HGPEFGAAVV QKAIVAHDAR VIDARNEEWE KAPKIFQFKD AGVNCVAVGS SPRFKVYEVD FGWGKPETVR
401: SGSNNRFNGM MYLYPGKAGG VSIDVEITLE ARVMEKLEKS KEFLLIDEEE DGNKITNGNG HGHANGNGFA

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.