Factsheet for VIT_16s0050g00830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g01180.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G23940.1	VIT_05s0020g01180.t01	AT1G09100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026230	Potato	cytosol	62.25	68.73
KRH08886	Soybean	cytosol, nucleus	68.76	68.15
VIT_16s0050g00870.t01	Wine grape	cytosol	90.79	68.13
KRH38407	Soybean	cytosol	68.31	67.86
Solyc03g025320.2.1	Tomato	cytosol, nucleus	67.87	66.81
Bra009716.1-P	Field mustard	cytosol	63.6	61.26
CDX80398	Canola	cytosol	63.82	61.21
CDY44265	Canola	cytosol	64.49	61.06
CDX88059	Canola	cytosol	63.82	60.43
Bra029388.1-P	Field mustard	cytosol	64.49	60.29
AT5G23940.1	Thale cress	mitochondrion	64.27	59.09
GSMUA_AchrUn_...	Banana	cytosol	56.4	56.28
TraesCS1A01G341300.1	Wheat	golgi, unclear	52.58	52.35
TraesCS1B01G354000.1	Wheat	cytosol	52.13	52.02
Os08t0562500-01	Rice	plastid	51.91	51.91
TraesCS1D01G343400.1	Wheat	golgi	51.91	51.68
HORVU1Hr1G075900.1	Barley	cytosol	52.13	51.67
Zm00001d031893_P001	Maize	mitochondrion	51.24	51.35
EES14067	Sorghum	cytosol, peroxisome, plastid	51.46	49.04
VIT_18s0001g10240.t01	Wine grape	cytosol	11.24	37.04
VIT_18s0001g10180.t01	Wine grape	cytosol	33.93	33.26
VIT_07s0031g00300.t01	Wine grape	plastid	13.93	32.63
VIT_07s0031g00310.t01	Wine grape	cytosol	9.21	32.28
VIT_18s0001g10200.t01	Wine grape	cytosol	22.92	32.18
VIT_18s0001g10230.t01	Wine grape	cytosol	23.6	31.53
VIT_07s0031g00280.t01	Wine grape	cytosol	8.76	30.71
VIT_07s0031g00290.t01	Wine grape	cytosol	11.69	30.23
VIT_08s0007g01930.t01	Wine grape	plastid	33.48	30.16
VIT_00s0410g00040.t01	Wine grape	cytosol	7.87	29.17
VIT_02s0109g00390.t01	Wine grape	cytosol	7.87	29.17
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	31.69	28.95
VIT_07s0031g00270.t01	Wine grape	cytosol	28.09	27.9

Protein Annotations

EntrezGene:100249245	wikigene:100249245	MapMan:21.9.5.3	Gene3D:3.30.559.10	InterPro:CAT-like_dom_sf	ProteinID:CCB47856
ProteinID:CCB47856.1	UniProt:F6H6K0	EMBL:FN595243	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:IPR023213	EntrezGene:LOC100249245	wikigene:LOC100249245	PFAM:PF02458	PANTHER:PTHR31896
PANTHER:PTHR31896:SF4	InterPro:Transferase	UniParc:UPI0001985B4F	ArrayExpress:VIT_16s0050g00830	EnsemblPlantsGene:VIT_16s0050g00830	EnsemblPlants:VIT_16s0050g00830.t01
unigene:Vvi.15955	RefSeq:XP_002272435	RefSeq:XP_002272435.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:-:17775980..17778984

Molecular Weight (calculated)

49753.7 Da

IEP (calculated)

5.381

GRAVY (calculated)

-0.229

Length

445 amino acids

Sequence
(BLAST)

001: MAADQVVKKE EDEVVKVSVH GKSHIMPTKK LGRRECQLIT FDLPYLAFYY NQKLLFYKGS DFEDMVGRLK DGLGVVLEEF YQLAGKLEKD EDGVFKVVYD
101: DEMEGVEVLE ASADQISVSD LTDVECTSMM KDMVPYTQVL NFEGLHKPLL VLQFTKLRDG LALGCAFNHA ILDGTSTWHF MTSWAEICNG ADSVSVPPFL
201: ERTKARKTRV KLDLPLNPAA APPNGTAGPP PLLRERIFRF SESQINQIKS TLNKTPSDGS KPFSTFQSLS THVWLAVTRA RQLKPEDVTV YTVFADCRKR
301: VDPPMPESYF GNLIQAIFTV TAAGLLYANP PEFAAAMIQK AIVTHDAKVI NKRNDDWESN PIIFQFKDAG VNCVAVGSSP RFKVYDVDFG FGKPERVRSG
401: SNNRFDGMVY LYQGKTGVGS IDMEISLEAG AMEKLEKDKE FLMEV

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.