Factsheet for PGSC0003DMT400026230

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g025320.2.1	Tomato	cytosol, nucleus	94.54	84.29
VIT_16s0050g00830.t01	Wine grape	cytosol	68.73	62.25
KRH08886	Soybean	cytosol, nucleus	68.49	61.47
KRH38407	Soybean	cytosol	67.49	60.71
Bra009716.1-P	Field mustard	cytosol	64.52	56.28
CDY44265	Canola	cytosol	65.51	56.17
CDX88059	Canola	cytosol	64.76	55.53
Bra029388.1-P	Field mustard	cytosol	65.51	55.46
CDX80398	Canola	cytosol	63.77	55.39
AT5G23940.1	Thale cress	mitochondrion	64.76	53.93
GSMUA_AchrUn_...	Banana	cytosol	57.82	52.24
TraesCS1A01G341300.1	Wheat	golgi, unclear	53.1	47.87
TraesCS1B01G354000.1	Wheat	cytosol	52.61	47.53
TraesCS1D01G343400.1	Wheat	golgi	52.36	47.2
HORVU1Hr1G075900.1	Barley	cytosol	52.36	46.99
Zm00001d031893_P001	Maize	mitochondrion	51.36	46.62
Os08t0562500-01	Rice	plastid	51.36	46.52
VIT_16s0050g00870.t01	Wine grape	cytosol	67.99	46.21
EES14067	Sorghum	cytosol, peroxisome, plastid	52.61	45.4
PGSC0003DMT400040083	Potato	extracellular	20.35	29.39
PGSC0003DMT400069898	Potato	cytosol	33.25	29.32
PGSC0003DMT400052409	Potato	cytosol, plastid	33.0	28.91
PGSC0003DMT400069755	Potato	cytosol, plastid	32.51	28.29
PGSC0003DMT400069897	Potato	plastid	32.26	28.26
PGSC0003DMT400048721	Potato	plasma membrane	27.3	28.06
PGSC0003DMT400084781	Potato	cytosol	29.78	26.67
PGSC0003DMT400093343	Potato	extracellular, plasma membrane	13.9	26.67
PGSC0003DMT400066504	Potato	cytosol, mitochondrion, peroxisome	30.02	25.91
PGSC0003DMT400020526	Potato	cytosol	29.03	25.71
PGSC0003DMT400066505	Potato	cytosol	29.28	25.05
PGSC0003DMT400066507	Potato	cytosol, nucleus, peroxisome	29.03	24.89
PGSC0003DMT400010306	Potato	cytosol	27.54	24.61
PGSC0003DMT400075303	Potato	cytosol	14.89	20.34

Protein Annotations

MapMan:21.9.5.3	Gene3D:3.30.559.10	InterPro:CAT-like_dom_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009653	GO:GO:0009987	GO:GO:0010090	GO:GO:0010143	GO:GO:0016043
GO:GO:0016740	GO:GO:0016747	GO:GO:0030154	GO:GO:0051179	GO:GO:0090626	InterPro:IPR023213
UniProt:M1AMV7	PFAM:PF02458	EnsemblPlantsGene:PGSC0003DMG400010117	PGSC:PGSC0003DMG400010117	EnsemblPlants:PGSC0003DMT400026230	PANTHER:PTHR31896
PANTHER:PTHR31896:SF4	InterPro:Transferase	UniParc:UPI000295165E	:	:	:

Description

HXXXD-type acyl-transferase family protein [Source:Projected from Arabidopsis thaliana (AT5G23940) TAIR;Acc:AT5G23940]

Coordinates

chr3:+:43594525..43597471

Molecular Weight (calculated)

44792.2 Da

IEP (calculated)

4.777

GRAVY (calculated)

-0.321

Length

403 amino acids

Sequence
(BLAST)

001: MVYKLGTENF EETVEKLKDG LALVLEDFYQ LAGKLGKDEE GVFKVEYDDD MDGVEVIVAE AQGIEVANLT DHQEGINKFQ DLIPCNKILN LEGLHRPLLA
101: VQLTKLKDGL AMGLAFNHAV LDGTSTWHFM TSWAQLCSGA TSISVPPFLE RTKARDTRVK LNLSKPSDAP EHAKSETKGD VSANVDPPLR DRVFKFSESA
201: IDQIKSKVNA NPPEGSNTPS FSTFQSLSAH VWLAVTRARQ LKPEEYTVYT VFADCRKRVD PPMPESYFGN LIQAIFTVTA AGLLLSNPIE FAAGMIQQAI
301: VNHDAKAIDE RNKEWESSPK IFEYKDAGVN CVAVGSSPRF KVYDVDFGWG KPEIVRSGLN NRFDGMVYLY PEKNGGRGID VEISLEANAM ERLEKDKEFL
401: MEA

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.