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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • cytosol 2
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400040083 Potato extracellular 78.57 59.14
Solyc02g062710.1.1 Tomato cytosol 71.43 33.19
PGSC0003DMT400066507 Potato cytosol, nucleus, peroxisome 63.33 28.3
PGSC0003DMT400066504 Potato cytosol, mitochondrion, peroxisome 61.43 27.62
PGSC0003DMT400066505 Potato cytosol 61.9 27.6
VIT_07s0031g00300.t01 Wine grape plastid 20.0 22.11
KRH04581 Soybean cytosol, endoplasmic reticulum 38.57 18.45
KRH57913 Soybean cytosol 37.62 18.12
KRH04296 Soybean cytosol 38.1 18.06
PGSC0003DMT400048721 Potato plasma membrane 33.33 17.86
PGSC0003DMT400010306 Potato cytosol 34.29 15.96
VIT_07s0031g00270.t01 Wine grape cytosol 32.38 15.18
PGSC0003DMT400020526 Potato cytosol 31.9 14.73
PGSC0003DMT400084781 Potato cytosol 30.95 14.44
PGSC0003DMT400026230 Potato cytosol 26.67 13.9
PGSC0003DMT400075303 Potato cytosol 18.57 13.22
PGSC0003DMT400052409 Potato cytosol, plastid 26.19 11.96
PGSC0003DMT400069898 Potato cytosol 25.71 11.82
PGSC0003DMT400069897 Potato plastid 25.71 11.74
PGSC0003DMT400069755 Potato cytosol, plastid 25.71 11.66
VIT_07s0031g00310.t01 Wine grape cytosol 5.24 8.66
VIT_07s0031g00290.t01 Wine grape cytosol 3.33 4.07
Protein Annotations
EnsemblPlants:PGSC0003DMT400093343EnsemblPlantsGene:PGSC0003DMG400042914Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213
InterPro:TransferasePANTHER:PTHR31896PFAM:PF02458PGSC:PGSC0003DMG400042914SEG:segTMHMM:TMhelix
UniParc:UPI0002958C02UniProt:M1DRR9MapMan:35.1:::
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400042914]
Coordinates
chr2:+:21032730..21033362
Molecular Weight (calculated)
24184.3 Da
IEP (calculated)
8.006
GRAVY (calculated)
-0.130
Length
210 amino acids
Sequence
(BLAST)
001: MAAFSLDARL IMHYLTDYLF GIFMALGLRY LAVLMSSQKN PFFKRQFPFK IDNFSNCISI PNERINSNSN SNSTHDPPVL RGKVFHFTKQ SIAKLKSKAN
101: VEMNTTKISS LQAVLAHIWQ SVIRCRNLDH NEETTSEVPI DMRKRLNPPL PEEFFGNAIY PATITVKTGE LLEHGGFEWA ALQINEMLAF HDHEKFKCIY
201: EYEIMFAICI
Best Arabidopsis Sequence Match ( AT3G50290.1 )
(BLAST)
001: MSHFFPSIDV KSIYGLSEPL LALQVTELKD GVFISFGYNH MVADGASIWN FFNTWSKICS NEYDHQKNLK PLVLRGWFLD KIDYRIHIPA SEADAPTSDE
101: ISQMPTSKER VFHFTKKNIS ELKTKANGET GSSDLIISSL QALSAHLWRS IIRHSGMKRE EETHCKVAVD LRQRLNPPLD KECFGNVNNL GVATVTVGEL
201: LDHEIGWAAL QISKMVRSQT DEKYKTFAEN WVNNVKISKT GDGSRMVCDS VVVSSSPWFD VYGNDFGWGT DCS
Arabidopsis Description
HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4J0K7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.