CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 28499913

msms PMID: 28499913 doi

S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata

Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57913	Soybean	cytosol	70.61	71.1
KRH04296	Soybean	cytosol	69.02	68.4
VIT_07s0031g00290.t01	Wine grape	cytosol	20.05	51.16
Solyc01g107070.2.1	Tomato	cytosol, mitochondrion	19.59	50.59
VIT_07s0031g00310.t01	Wine grape	cytosol	14.12	48.82
VIT_07s0031g00300.t01	Wine grape	plastid	20.96	48.42
VIT_07s0031g00270.t01	Wine grape	cytosol	47.84	46.88
PGSC0003DMT400010306	Potato	cytosol	47.61	46.34
Solyc08g005890.2.1	Tomato	cytosol	45.79	46.0
PGSC0003DMT400048721	Potato	plasma membrane	41.0	45.92
Solyc12g096250.1.1	Tomato	cytosol	47.38	45.81
Solyc02g093180.2.1	Tomato	mitochondrion	46.47	45.03
Solyc01g107080.2.1	Tomato	cytoskeleton, cytosol, peroxisome	41.46	43.33
Solyc02g062710.1.1	Tomato	cytosol	43.74	42.48
PGSC0003DMT400066504	Potato	cytosol, mitochondrion, peroxisome	44.87	42.18
PGSC0003DMT400075303	Potato	cytosol	28.25	42.03
PGSC0003DMT400066507	Potato	cytosol, nucleus, peroxisome	44.65	41.7
Solyc10g055730.1.1	Tomato	cytosol	28.7	41.04
PGSC0003DMT400066505	Potato	cytosol	43.96	40.98
PGSC0003DMT400040083	Potato	extracellular	25.97	40.86
PGSC0003DMT400093343	Potato	extracellular, plasma membrane	18.45	38.57
KRH40991	Soybean	cytosol	34.4	36.74
KRH61317	Soybean	vacuole	33.71	36.54
KRH40990	Soybean	extracellular	25.28	36.39
Solyc01g107050.2.1	Tomato	cytosol	13.67	36.36
KRH61316	Soybean	cytosol	37.36	35.57
KRH61319	Soybean	cytosol, mitochondrion, nucleus	37.81	35.39
KRH52020	Soybean	cytosol	36.45	35.09
KRH61321	Soybean	cytosol	36.67	35.0
KRH61619	Soybean	cytosol	36.22	34.57
KRH52019	Soybean	cytosol	35.54	34.14
KRH61320	Soybean	cytosol, plastid	37.59	33.95
KRH61322	Soybean	cytosol	23.46	33.12
KRH73150	Soybean	cytosol, plastid	34.85	32.01
KRG97771	Soybean	plastid	33.94	31.5
KRH14988	Soybean	cytosol, plastid	34.17	31.32
KRH66032	Soybean	cytosol	32.8	30.84
KRH75833	Soybean	cytosol	33.26	30.8
KRH31113	Soybean	plastid	34.4	30.63
KRH08886	Soybean	cytosol, nucleus	28.25	27.62
KRH38407	Soybean	cytosol	27.56	27.01

Protein Annotations

EMBL:ACUP02010446	EnsemblPlants:KRH04581	EnsemblPlantsGene:GLYMA_17G171300	EntrezGene:100794546	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF12	PFAM:PF02458	ProteinID:KRH04581	ProteinID:KRH04581.1	SEG:seg
UniParc:UPI000233F093	UniProt:I1MVW0	MapMan:50.2.3	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:16307104..16309314

Molecular Weight (calculated)

49434.3 Da

IEP (calculated)

7.243

GRAVY (calculated)

-0.173

Length

439 amino acids

Sequence
(BLAST)

001: MEAVQLMSTT TIKASSNNYN DNSVQKIDLT PWDLQFFHIG SIQRGLLFRK EKNTEYCQIE HLQHSLSSTL AFFPLLAGRL AILEHHDNTV SSHIVCDNKG
101: VPFVHAAAHN TTVADILQPK YVPPILRSFF ALNGVKNYEA TSQPVLAVQV TELFDGIFIA LSINHVVADG KSFWLFVNSW AEISRGSLKI SKFPSLKRCF
201: LDGVDRPIRF LFTKELEKEP SKNLQPQTRP VRVFHFTKEK IADLKSKANA EANTDKISSL QALLANLWRS VIRCQHVEPH EEIQFTMPVG VRPRVVPPLP
301: EDYFGNAALI GRVTMKAGEL LQGELGKIAL EINKMISSQS DEKVKNHYES WARTPRQRGV AYSNTLNVGS SPRFNIYGND FGWGKPMAVR SGGDFMSYSI
401: VFLFAGFEEG SIDIEVFLPY EILEAMGNDP EFMHICHSE

Best Arabidopsis Sequence Match ( AT5G67150.1 )
(BLAST)

001: MADEVVVISK SIVRPESYNE ESDRVKIHLT PWDLFFLRSE YPQRGLLFPQ PDPETHIISQ LKSSLSVALK IFYPFAGRLV KVENEDAGTA SFYVDCDGSG
101: VKFIHASAKS VSVSDVLEPV DSNVPEFLNR FFPANGVRSC EGISESLIAF QVTELKDGVF IGFGYNHIVA DGSSFWSFFN TWSEICFNGF DADHRRKFPP
201: LLLRGWFLDG IEYPIRIPLP ETETPNRVVV TSSLLQEKIF RVTSRNISEL KAKANGEVDS DDRKISSLQA VSAYMWRSII RNSGLNPEEV IHCKLLVDMR
301: GRLNPPLEKE CFGNVVGFAT VTTTVAEMLH NGLGWAALQI NKTVGSQTNE EFREFAENWV KKPSILNAKA FSNSITIASS PRFNVYGNDF GWGKPIAVRA
401: GPGNTTDGKL IAYPGIEEGN IEFQTCLSSS VLEKLSTDEE FLKHVCVV

Arabidopsis Description

Anthranilate N-hydroxycinnamoyl/benzoyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FH98]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.