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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • cytosol 4
  • peroxisome 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
PTS1:peroxisome
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g107050.2.1 Tomato cytosol 50.59 52.12
PGSC0003DMT400066504 Potato cytosol, mitochondrion, peroxisome 95.88 34.9
VIT_07s0031g00300.t01 Wine grape plastid 38.24 34.21
Solyc01g107080.2.1 Tomato cytoskeleton, cytosol, peroxisome 82.94 33.57
Solyc02g062710.1.1 Tomato cytosol 74.71 28.1
VIT_07s0031g00310.t01 Wine grape cytosol 20.0 26.77
KRH57913 Soybean cytosol 51.18 19.95
KRH04296 Soybean cytosol 51.76 19.86
KRH04581 Soybean cytosol, endoplasmic reticulum 50.59 19.59
Solyc10g055730.1.1 Tomato cytosol 34.71 19.22
Solyc02g093180.2.1 Tomato mitochondrion 50.0 18.76
Solyc12g096250.1.1 Tomato cytosol 48.24 18.06
Solyc08g005890.2.1 Tomato cytosol 45.88 17.85
VIT_07s0031g00270.t01 Wine grape cytosol 45.88 17.41
Solyc04g078660.1.1 Tomato cytosol 41.18 15.62
Solyc05g052680.1.1 Tomato cytosol, plastid 40.59 15.1
Solyc05g052670.1.1 Tomato plastid 40.59 14.97
Solyc09g014280.1.1 Tomato cytosol, plastid 38.82 14.35
Solyc03g025320.2.1 Tomato cytosol, nucleus 36.47 13.72
Solyc04g078350.1.1 Tomato cytosol 9.41 9.7
VIT_07s0031g00290.t01 Wine grape cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc01g107070.2.1EnsemblPlantsGene:Solyc01g107070.2Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824GO:GO:0016740
GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31896PFAM:PF02458
UniParc:UPI0002767AA9UniProt:K4B2S4MapMan:35.1:::
Description
No Description!
Coordinates
chr1:-:94721935..94722891
Molecular Weight (calculated)
19257.3 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.189
Length
170 amino acids
Sequence
(BLAST)
001: MLRERVFHFT KESVAKLKAK ANLVMNTTKI SSLQAVLAHV WRSVIRCRHL DLSEETTFEV SIDMRGRLNP PLPEGFFGNA ICPATVTIKT GELLEHEFGW
101: AALQINETIA LHDQEKLKCI YESWMNDPEY DFGWGKPITH RSGIGNMLEG KITVSPGQEE GSMILEICRL
Best Arabidopsis Sequence Match ( AT5G67150.1 )
(BLAST)
001: MADEVVVISK SIVRPESYNE ESDRVKIHLT PWDLFFLRSE YPQRGLLFPQ PDPETHIISQ LKSSLSVALK IFYPFAGRLV KVENEDAGTA SFYVDCDGSG
101: VKFIHASAKS VSVSDVLEPV DSNVPEFLNR FFPANGVRSC EGISESLIAF QVTELKDGVF IGFGYNHIVA DGSSFWSFFN TWSEICFNGF DADHRRKFPP
201: LLLRGWFLDG IEYPIRIPLP ETETPNRVVV TSSLLQEKIF RVTSRNISEL KAKANGEVDS DDRKISSLQA VSAYMWRSII RNSGLNPEEV IHCKLLVDMR
301: GRLNPPLEKE CFGNVVGFAT VTTTVAEMLH NGLGWAALQI NKTVGSQTNE EFREFAENWV KKPSILNAKA FSNSITIASS PRFNVYGNDF GWGKPIAVRA
401: GPGNTTDGKL IAYPGIEEGN IEFQTCLSSS VLEKLSTDEE FLKHVCVV
Arabidopsis Description
Anthranilate N-hydroxycinnamoyl/benzoyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FH98]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.