CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75833	Soybean	cytosol	95.93	94.51
CDY40314	Canola	cytosol	67.24	68.86
Bra009632.1-P	Field mustard	plastid	60.81	68.6
AT5G01210.1	Thale cress	cytosol	69.59	68.42
Bra028893.1-P	Field mustard	cytosol, plastid	69.38	67.64
VIT_08s0007g01930.t01	Wine grape	plastid	71.52	67.61
PGSC0003DMT400052409	Potato	cytosol, plastid	65.31	66.3
Solyc09g014280.1.1	Tomato	cytosol, plastid	64.45	65.43
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	68.09	62.97
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	67.67	62.2
KRH73150	Soybean	cytosol, plastid	62.95	61.51
KRH14988	Soybean	cytosol, plastid	62.1	60.54
GSMUA_Achr10P...	Banana	plastid	48.61	54.18
KRG97771	Soybean	plastid	54.18	53.49
Os01t0854000-01	Rice	plastid	53.96	52.17
GSMUA_Achr8P19570_001	Banana	plastid	46.9	51.9
Zm00001d042826_P001	Maize	plastid	53.32	51.45
GSMUA_AchrUn_...	Banana	plastid	45.4	51.08
Os05t0449200-01	Rice	plastid	52.46	51.04
EES01771	Sorghum	plastid	53.96	50.91
KRH31113	Soybean	plastid	53.53	50.71
TraesCS3A01G367900.1	Wheat	plastid	52.68	49.9
TraesCS3B01G399600.1	Wheat	plastid	52.46	49.8
TraesCS3D01G360900.1	Wheat	plastid	52.46	49.7
Zm00001d010079_P001	Maize	plastid	52.68	49.4
Zm00001d012333_P001	Maize	plastid	53.75	49.22
EES19625	Sorghum	plastid	53.75	48.74
TraesCS1A01G278800.1	Wheat	cytosol, plastid	53.1	46.97
TraesCS1B01G287800.1	Wheat	cytosol, plastid	52.68	46.68
HORVU3Hr1G085100.2	Barley	plastid	52.68	46.07
HORVU1Hr1G073330.1	Barley	cytosol	52.68	44.17
TraesCS1D01G278100.1	Wheat	plastid	52.89	43.26
KRH40990	Soybean	extracellular	28.05	42.95
KRH61316	Soybean	cytosol	38.54	39.05
KRH52020	Soybean	cytosol	38.12	39.04
KRH61317	Soybean	vacuole	33.4	38.52
KRH52019	Soybean	cytosol	37.69	38.51
KRH61321	Soybean	cytosol	37.9	38.48
KRH40991	Soybean	cytosol	32.76	37.23
KRH61619	Soybean	cytosol	36.62	37.17
KRH61319	Soybean	cytosol, mitochondrion, nucleus	37.26	37.1
KRH61320	Soybean	cytosol, plastid	38.54	37.04
KRH04296	Soybean	cytosol	32.12	33.86
KRH61322	Soybean	cytosol	22.48	33.76
KRH57913	Soybean	cytosol	31.26	33.49
KRH04581	Soybean	cytosol, endoplasmic reticulum	30.84	32.8
KRH38407	Soybean	cytosol	30.19	31.47
KRH08886	Soybean	cytosol, nucleus	29.98	31.18

Protein Annotations

EMBL:ACUP02001861	EnsemblPlants:KRH66032	EnsemblPlantsGene:GLYMA_03G078200	EntrezGene:100804321	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF5	PFAM:PF02458	ProteinID:KRH66032	ProteinID:KRH66032.1	SEG:seg
SUPFAM:SSF52777	UniParc:UPI0002336B45	UniProt:I1JLR1	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:+:19612664..19615006

Molecular Weight (calculated)

51227.1 Da

IEP (calculated)

8.100

GRAVY (calculated)

-0.129

Length

467 amino acids

Sequence
(BLAST)

001: MPSSSTTIVS KCVIHPDQKS NMKPLRLSVS DLPMLSCHYI QKGVLLTAPP SSFDDLILSF KHTLSIALSH FPALAGRFET DSNGYVNIVC NDAGVDFIHA
101: KAKHLTLNAV VSPSLVDVHP CFKEEFFAYD MTISYAGHNT PLAAVQVTEL ADGVFVGCTV NHSVTDGTSF WHFFNTFAAV TKGGAAKKVL RAPDFTRDTV
201: FNSAAVLTVP SGGPAVTFDV NQPLRERVFH FSREAIQKLK QRANNTVNNE LTEVMGKQVN DGWKIVNGNG KINGNGRNEI SSFQSLSAQL WRAVTRARKF
301: NDPAKTSTFR MAVNCRHRLE PKMDALYFGN AIQSIPTVAT VGEILSRDLR FCADLLHRNV VAHDDATVRR GIEDWESAPR LFPLGNFDGA MITMGSSPRF
401: PMYDNDFGWG RPVAIRSGKA NKFDGKISAF PGREGNGSVD LEVVLAPATM AGLENDMEFM QYVTQVV

Best Arabidopsis Sequence Match ( AT5G01210.1 )
(BLAST)

001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC

Arabidopsis Description

AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.