CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97771	Soybean	plastid	86.61	90.27
KRH73150	Soybean	cytosol, plastid	61.46	63.39
KRH14988	Soybean	cytosol, plastid	61.26	63.05
CDX74815	Canola	cytosol, plastid	53.14	60.37
CDY07045	Canola	peroxisome	52.74	57.78
CDX93218	Canola	peroxisome	51.93	56.76
CDY24938	Canola	cytosol, plastid	52.54	56.43
Bra004996.1-P	Field mustard	cytosol	54.77	56.37
AT2G39980.1	Thale cress	cytosol, plastid	54.56	55.81
Bra017041.1-P	Field mustard	cytosol	53.14	55.74
KRH66032	Soybean	cytosol	50.71	53.53
KRH75833	Soybean	cytosol	50.91	52.95
GSMUA_Achr8P19570_001	Banana	plastid	44.42	51.9
GSMUA_Achr10P...	Banana	plastid	44.02	51.79
Os01t0854000-01	Rice	plastid	48.07	49.07
Zm00001d042826_P001	Maize	plastid	47.87	48.76
GSMUA_AchrUn_...	Banana	plastid	40.57	48.19
EES01771	Sorghum	plastid	48.07	47.88
Zm00001d010079_P001	Maize	plastid	48.07	47.59
Os05t0449200-01	Rice	plastid	46.04	47.29
TraesCS3A01G367900.1	Wheat	plastid	47.06	47.06
TraesCS3D01G360900.1	Wheat	plastid	47.06	47.06
TraesCS3B01G399600.1	Wheat	plastid	46.65	46.75
Zm00001d012333_P001	Maize	plastid	48.07	46.47
EES19625	Sorghum	plastid	48.48	46.41
TraesCS1B01G287800.1	Wheat	cytosol, plastid	46.45	43.45
HORVU3Hr1G085100.2	Barley	plastid	47.06	43.45
TraesCS1A01G278800.1	Wheat	cytosol, plastid	46.25	43.18
HORVU1Hr1G073330.1	Barley	cytosol	47.06	41.65
KRH40990	Soybean	extracellular	25.36	40.98
KRH52020	Soybean	cytosol	37.32	40.35
TraesCS1D01G278100.1	Wheat	plastid	46.45	40.11
KRH61316	Soybean	cytosol	37.32	39.91
KRH61317	Soybean	vacuole	32.66	39.75
KRH61321	Soybean	cytosol	36.92	39.57
KRH52019	Soybean	cytosol	36.31	39.17
KRH40991	Soybean	cytosol	32.45	38.93
KRH61619	Soybean	cytosol	36.11	38.7
KRH61319	Soybean	cytosol, mitochondrion, nucleus	36.71	38.59
KRH61320	Soybean	cytosol, plastid	36.51	37.04
KRH61322	Soybean	cytosol	21.7	34.41
KRH04581	Soybean	cytosol, endoplasmic reticulum	30.63	34.4
KRH04296	Soybean	cytosol	30.63	34.09
KRH57913	Soybean	cytosol	29.82	33.72
KRH08886	Soybean	cytosol, nucleus	29.41	32.29
KRH38407	Soybean	cytosol	29.21	32.14

Protein Annotations

EMBL:ACUP02007123	EnsemblPlants:KRH31113	EnsemblPlantsGene:GLYMA_11G227600	EntrezGene:100799704	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF11	PFAM:PF02458	ProteinID:KRH31113	ProteinID:KRH31113.1	SEG:seg
UniParc:UPI0003DED711	UniProt:A0A0R0HTX2	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:32263397..32265463

Molecular Weight (calculated)

54216.6 Da

IEP (calculated)

7.278

GRAVY (calculated)

-0.124

Length

493 amino acids

Sequence
(BLAST)

001: MNQDNLYKQD IPSVLFCHRS TSVIMLCVKM SSSSSSPAVL SKCTVFPHRN STLGDLKLSI SDLNMFLSHY IQKGCLFTTP SLPSHSHTLI PHLKNALSQT
101: LSLFPPLAGR LKTDTDGFVY ITCNDAGVDF IHATAADISV ADLLSPSSSS DVPPISKQLF PFHHKISYTA HSSPIMAFQV TDLADAVFLG CAVCHSVTDG
201: ASFWNFFNTF AGISRGATIS PSSLPDFRRE SILSSNVVLR LPEDIKVTFN VEEPFRERIF SFSRESIQKL KATVNKSLTL FPPPENGDAV ELMAKMSSDT
301: QLRTVTEISS FQSLCALVWR CVTKARNLEG SKTTTFRMAV NVRQRLEPKL GDSYFGNAIQ SIATCAEAGD VASKELRWCA EQLNKSVKAF DGATVRRNLE
401: NWEREPKCFE LGNHDGATVQ MGSSPRFPMY DNDFGWGRPL AVRSGGANKF DGKMSAFPGR NGGGAIDLEV VLAPETMARL ESDSEFMFYV SGW

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.