CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73150	Soybean	cytosol, plastid	91.65	91.84
PGSC0003DMT400069898	Potato	cytosol	66.39	69.58
Solyc05g052680.1.1	Tomato	cytosol, plastid	66.39	69.58
PGSC0003DMT400069755	Potato	cytosol, plastid	66.6	68.9
Solyc05g052670.1.1	Tomato	plastid	66.18	68.76
PGSC0003DMT400069897	Potato	plastid	65.97	68.7
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	69.52	68.38
KRG97771	Soybean	plastid	62.84	63.64
KRH66032	Soybean	cytosol	60.54	62.1
KRH31113	Soybean	plastid	63.05	61.26
KRH75833	Soybean	cytosol	60.13	60.76
GSMUA_Achr10P...	Banana	plastid	48.43	55.37
GSMUA_Achr8P19570_001	Banana	plastid	48.43	54.98
GSMUA_AchrUn_...	Banana	plastid	47.18	54.46
Os01t0854000-01	Rice	plastid	53.44	53.0
Zm00001d042826_P001	Maize	plastid	53.44	52.89
EES01771	Sorghum	plastid	53.86	52.12
TraesCS3A01G367900.1	Wheat	plastid	53.44	51.93
Os05t0449200-01	Rice	plastid	51.57	51.46
TraesCS3B01G399600.1	Wheat	plastid	52.82	51.42
TraesCS3D01G360900.1	Wheat	plastid	52.82	51.32
Zm00001d010079_P001	Maize	plastid	53.03	51.0
Zm00001d012333_P001	Maize	plastid	53.44	50.2
EES19625	Sorghum	plastid	53.86	50.1
HORVU3Hr1G085100.2	Barley	plastid	53.24	47.75
TraesCS1A01G278800.1	Wheat	cytosol, plastid	51.57	46.78
TraesCS1B01G287800.1	Wheat	cytosol, plastid	51.36	46.68
HORVU1Hr1G073330.1	Barley	cytosol	51.77	44.52
KRH40990	Soybean	extracellular	27.56	43.28
TraesCS1D01G278100.1	Wheat	plastid	51.57	43.26
KRH61317	Soybean	vacuole	34.66	40.99
KRH61321	Soybean	cytosol	39.25	40.87
KRH52020	Soybean	cytosol	38.83	40.79
KRH61316	Soybean	cytosol	39.25	40.78
KRH52019	Soybean	cytosol	38.41	40.26
KRH61619	Soybean	cytosol	38.41	40.0
KRH40991	Soybean	cytosol	34.24	39.9
KRH61319	Soybean	cytosol, mitochondrion, nucleus	38.83	39.66
KRH61320	Soybean	cytosol, plastid	38.83	38.27
KRH61322	Soybean	cytosol	24.84	38.26
KRH04296	Soybean	cytosol	32.78	35.44
KRH57913	Soybean	cytosol	31.94	35.09
KRH04581	Soybean	cytosol, endoplasmic reticulum	31.32	34.17
KRH08886	Soybean	cytosol, nucleus	28.39	30.29
KRH38407	Soybean	cytosol	27.97	29.91

Protein Annotations

EMBL:ACUP02008549	EnsemblPlants:KRH14988	EnsemblPlantsGene:GLYMA_14G061800	EntrezGene:100779616	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF11	PFAM:PF02458	ProteinID:KRH14988	ProteinID:KRH14988.1	SEG:seg
UniParc:UPI000233AFDA	UniProt:I1M7X5	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:5003785..5005224

Molecular Weight (calculated)

53489.8 Da

IEP (calculated)

8.857

GRAVY (calculated)

-0.272

Length

479 amino acids

Sequence
(BLAST)

001: MPSPAPTMLS KCTVFPDQKS TLGNLKLSVS DLPMLSCHYI QKGCLFTHPN LPLHSLIPLL KSALSRTLSL FPPLAGRLIT DSHGYLYISC NDAGVDFIHA
101: NATGLRICDL LSPLDVPQSF KDFFSFDRKV SYTGHFSPIL AVQVTELADG IFIGCAVNHA VTDGTSFWNF FNTFAQFSRG ASNCIRNTPD FRRDSFLISD
201: AVLRLPEDGP QVTFDANVPL RERIFSFSRE AIQKLKAKAN NRRWPENNNN VAGELMRKQS NDNLLKENKA TTILETWFKV NSKPQTVTET VEISSFQSVC
301: ALLWRGVTRA RKLPSSKTTT FRMAVNCRHR IEPKLEAYYF GNAIQSVPTY ASAGEVLSRD LRWCAEQLNK NVKAHDDAMV RRFVDDWERN PRCFPLGNPD
401: GASITMGSSP RFPMYDNNFG WGRPLAVRSG RANKFDGKIS AFPGRDGTGT VGLEVVLAPQ TMEALESDPE FMKYATSQL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.