Factsheet for Bra017041.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07045	Canola	peroxisome	93.4	97.56
Bra004996.1-P	Field mustard	cytosol	87.87	86.22
AT2G39980.1	Thale cress	cytosol, plastid	84.89	82.78
PGSC0003DMT400069755	Potato	cytosol, plastid	64.89	65.87
PGSC0003DMT400069898	Potato	cytosol	63.83	65.65
Solyc05g052670.1.1	Tomato	plastid	64.04	65.29
Solyc05g052680.1.1	Tomato	cytosol, plastid	63.4	65.21
PGSC0003DMT400069897	Potato	plastid	63.62	65.0
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	64.26	62.01
Bra028893.1-P	Field mustard	cytosol, plastid	63.19	62.0
Bra009632.1-P	Field mustard	plastid	53.62	60.87
GSMUA_Achr10P...	Banana	plastid	50.21	56.32
KRG97771	Soybean	plastid	55.32	54.97
GSMUA_Achr8P19570_001	Banana	plastid	48.94	54.5
KRH31113	Soybean	plastid	55.74	53.14
GSMUA_AchrUn_...	Banana	plastid	46.38	52.53
Os01t0854000-01	Rice	plastid	53.19	51.76
Zm00001d042826_P001	Maize	plastid	53.19	51.65
TraesCS3A01G367900.1	Wheat	plastid	54.04	51.52
EES01771	Sorghum	plastid	54.26	51.52
TraesCS3D01G360900.1	Wheat	plastid	53.83	51.32
TraesCS3B01G399600.1	Wheat	plastid	53.62	51.22
Zm00001d012333_P001	Maize	plastid	54.04	49.8
Os05t0449200-01	Rice	plastid	50.85	49.79
Zm00001d010079_P001	Maize	plastid	52.13	49.2
EES19625	Sorghum	plastid	52.34	47.77
HORVU3Hr1G085100.2	Barley	plastid	54.26	47.75
TraesCS1A01G278800.1	Wheat	cytosol, plastid	51.49	45.83
TraesCS1B01G287800.1	Wheat	cytosol, plastid	51.06	45.54
Bra005957.1-P	Field mustard	plastid	17.45	43.16
HORVU1Hr1G073330.1	Barley	cytosol	50.85	42.91
TraesCS1D01G278100.1	Wheat	plastid	51.28	42.21
Bra028682.1-P	Field mustard	cytosol	33.4	40.26
Bra035334.1-P	Field mustard	cytosol	37.45	39.2
Bra028681.1-P	Field mustard	cytosol	35.74	37.0
Bra037763.1-P	Field mustard	cytosol	30.21	33.26
Bra003184.1-P	Field mustard	cytosol	31.28	33.03
Bra012137.1-P	Field mustard	cytosol	31.06	32.81
Bra036069.1-P	Field mustard	plastid	31.28	32.67
Bra029999.1-P	Field mustard	cytosol	22.34	32.41
Bra030000.1-P	Field mustard	cytosol	12.34	32.04
Bra028199.1-P	Field mustard	cytosol	30.21	31.7
Bra015058.1-P	Field mustard	cytosol, plastid	30.43	31.64
Bra009716.1-P	Field mustard	cytosol	30.0	30.52
Bra033050.1-P	Field mustard	extracellular, golgi	23.4	30.47
Bra029388.1-P	Field mustard	cytosol	30.21	29.83
Bra037126.1-P	Field mustard	cytosol	28.51	29.65
Bra002962.1-P	Field mustard	cytosol	29.57	29.57
Bra012138.1-P	Field mustard	cytosol	26.17	28.15
Bra028166.1-P	Field mustard	cytosol	15.96	27.27

Protein Annotations

EnsemblPlants:Bra017041.1	EnsemblPlants:Bra017041.1-P	EnsemblPlantsGene:Bra017041	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF11	PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	UniParc:UPI0002544D71	UniProt:M4DKL0
MapMan:50.2.3	:	:	:	:	:

Description

AT5G01210 (E=7e-163) | transferase family protein

Coordinates

chrA04:-:16971843..16973255

Molecular Weight (calculated)

51505.2 Da

IEP (calculated)

6.738

GRAVY (calculated)

-0.216

Length

470 amino acids

Sequence
(BLAST)

001: MPSLENSVTV ISTNKVFPDK KSTLADLKLS VSDLPMLSCH YIQKGCLFTR PHLTPHELLS HLEHSLSLTL SHFPPLAGRL STSEDGHVFL SCNDAGADIV
101: FAEAKSVSVS DVITGGDVPG VVKEFFSYDR AVRYEGHNRP ILAVQVTELN DGVFIGCSVN HAVVDGTSLW NFVNTFAEVS RGAENVTRQP DFTRESVLIS
201: PAVLKVPRGG PKVTFDENAP LRERIFSFTR EQILELKAMV NGERNGVEVL GKQSNDKLNG KLTEMLESLL GSNDAVSKTE SKREISSFQS LCALLWRAIT
301: RARNLPSAKT TTFRMAVNVR HRLSPKLNPE YFGNAIQSVP TFATAGEVLS RDIRWTADQL NRSVAAHGDE RIREVVADWE ANPRCFPLGN ADGASVTMGS
401: SPRFPMYEND FGWGKPVAVR SGRANKFDGK ISAFPGRDGN GSVDLEVVIA PETMAGIECD GEFMRYVSKV

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.