Factsheet for Bra004996.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74815	Canola	cytosol, plastid	89.77	99.08
Bra017041.1-P	Field mustard	cytosol	86.22	87.87
AT2G39980.1	Thale cress	cytosol, plastid	87.06	86.51
PGSC0003DMT400069898	Potato	cytosol	64.93	68.05
PGSC0003DMT400069755	Potato	cytosol, plastid	65.34	67.6
Solyc05g052680.1.1	Tomato	cytosol, plastid	64.09	67.18
Solyc05g052670.1.1	Tomato	plastid	64.51	67.03
PGSC0003DMT400069897	Potato	plastid	64.3	66.96
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	66.39	65.3
Bra028893.1-P	Field mustard	cytosol, plastid	63.05	63.05
Bra009632.1-P	Field mustard	plastid	53.86	62.32
KRG97771	Soybean	plastid	55.53	56.24
GSMUA_Achr10P...	Banana	plastid	49.06	56.09
KRH31113	Soybean	plastid	56.37	54.77
GSMUA_Achr8P19570_001	Banana	plastid	47.18	53.55
Os01t0854000-01	Rice	plastid	53.03	52.59
GSMUA_AchrUn_...	Banana	plastid	45.51	52.53
Zm00001d042826_P001	Maize	plastid	52.82	52.27
EES01771	Sorghum	plastid	53.65	51.92
TraesCS3A01G367900.1	Wheat	plastid	52.82	51.32
Os05t0449200-01	Rice	plastid	51.36	51.25
TraesCS3D01G360900.1	Wheat	plastid	52.61	51.12
TraesCS3B01G399600.1	Wheat	plastid	51.98	50.61
Zm00001d010079_P001	Maize	plastid	52.19	50.2
Zm00001d012333_P001	Maize	plastid	53.03	49.8
EES19625	Sorghum	plastid	52.4	48.74
HORVU3Hr1G085100.2	Barley	plastid	52.82	47.38
TraesCS1A01G278800.1	Wheat	cytosol, plastid	51.15	46.4
TraesCS1B01G287800.1	Wheat	cytosol, plastid	50.52	45.92
Bra005957.1-P	Field mustard	plastid	17.33	43.68
HORVU1Hr1G073330.1	Barley	cytosol	50.31	43.27
TraesCS1D01G278100.1	Wheat	plastid	50.73	42.56
Bra028682.1-P	Field mustard	cytosol	33.82	41.54
Bra035334.1-P	Field mustard	cytosol	37.37	39.87
Bra028681.1-P	Field mustard	cytosol	36.53	38.55
Bra036069.1-P	Field mustard	plastid	31.11	33.11
Bra012137.1-P	Field mustard	cytosol	30.69	33.03
Bra037763.1-P	Field mustard	cytosol	29.44	33.02
Bra003184.1-P	Field mustard	cytosol	30.48	32.81
Bra029999.1-P	Field mustard	cytosol	22.13	32.72
Bra015058.1-P	Field mustard	cytosol, plastid	30.69	32.52
Bra028199.1-P	Field mustard	cytosol	29.65	31.7
Bra030000.1-P	Field mustard	cytosol	11.9	31.49
Bra033050.1-P	Field mustard	extracellular, golgi	22.76	30.19
Bra002962.1-P	Field mustard	cytosol	29.23	29.79
Bra009716.1-P	Field mustard	cytosol	28.6	29.65
Bra037126.1-P	Field mustard	cytosol	27.77	29.42
Bra029388.1-P	Field mustard	cytosol	28.81	28.99
Bra012138.1-P	Field mustard	cytosol	25.68	28.15
Bra028166.1-P	Field mustard	cytosol	15.66	27.27

Protein Annotations

EnsemblPlants:Bra004996.1	EnsemblPlants:Bra004996.1-P	EnsemblPlantsGene:Bra004996	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF11	PFAM:PF02458	SEG:seg	UniParc:UPI00025472F1	UniProt:M4CLA9	MapMan:50.2.3

Description

AT2G39980 (E=6e-221) | transferase family protein

Coordinates

chrA05:+:2883538..2884977

Molecular Weight (calculated)

52535.5 Da

IEP (calculated)

8.238

GRAVY (calculated)

-0.254

Length

479 amino acids

Sequence
(BLAST)

001: MPSLENSVTV ISRSRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTR PHLPPHALLS HLKHSLSLTL SHFPPLAGRL STSEDGHVFL SCNDAGADFV
101: SAAAKSVRVG DVIGGIDVPD VVKEFFTYDR TVSYDGHNRP ILAVQVTELN DGVFIGCSVN HSVTDGTSLW NFINTFAEVS RGAGGNVTRH PDFTRESVLI
201: SPAVLKVPQG GPKVTFNENE PLRERIFSFS REQILELKAM VNKKRSWTVG NGEINGVEVF GKQSNDKLNG KENGKLTEML ESLLLRNDVV AVEISSFQSL
301: SALLWRAITR ARKLPSSKTT TFRMAVNVRH RLSPKLDPEY FGNAIQSVPT FATAGEVLSR DIRWSADQLN RSVAAHQDGK IRDTVADWEA NPRCFPLGNP
401: DGASVTMGSS PRFPMYDNDF GWGKPVAVRS GRANKFDGKI SAFPGRDGNG SVDLEVVLAP ETMAGIETDG EFMRYVSKK

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.