CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028681.1-P	Field mustard	cytosol	92.16	98.46
CDY14026	Canola	cytosol	46.19	87.5
CDY14025	Canola	extracellular	26.19	83.55
CDY14027	Canola	cytosol, nucleus, plastid	62.27	73.48
CDY40772	Canola	cytosol, nucleus, plastid	62.27	73.12
CDX81074	Canola	plastid	66.8	70.43
AT5G07860.1	Thale cress	cytosol	65.77	70.26
CDX81073	Canola	cytosol	65.98	69.41
AT5G07870.1	Thale cress	cytosol	65.98	68.97
CDX78313	Canola	cytosol	65.98	67.94
CDX71519	Canola	cytosol, nucleus, plastid	53.4	57.68
CDY02424	Canola	cytosol	52.78	57.02
CDY21238	Canola	cytosol	52.37	56.57
VIT_18s0001g10180.t01	Wine grape	cytosol	47.22	50.44
KRH61321	Soybean	cytosol	46.8	49.35
KRH52020	Soybean	cytosol	45.77	48.68
KRH61316	Soybean	cytosol	46.19	48.59
KRH52019	Soybean	cytosol	45.57	48.36
VIT_18s0001g10230.t01	Wine grape	cytosol	32.99	48.05
KRH40991	Soybean	cytosol	40.62	47.93
KRH40990	Soybean	extracellular	30.1	47.87
KRH61619	Soybean	cytosol	45.36	47.83
KRH61319	Soybean	cytosol, mitochondrion, nucleus	45.98	47.55
Solyc04g078660.1.1	Tomato	cytosol	43.92	47.54
PGSC0003DMT400084781	Potato	cytosol	43.51	46.89
PGSC0003DMT400020526	Potato	cytosol	43.3	46.15
KRH61317	Soybean	vacuole	37.73	45.19
VIT_18s0001g10200.t01	Wine grape	cytosol	29.48	45.11
KRH61320	Soybean	cytosol, plastid	45.15	45.06
TraesCS7B01G414500.1	Wheat	cytosol	8.45	44.57
KRH61322	Soybean	cytosol	27.01	42.12
CDX74815	Canola	cytosol, plastid	34.02	38.02
CDY24938	Canola	cytosol, plastid	35.88	37.91
CDY07045	Canola	peroxisome	34.23	36.89
CDY40314	Canola	cytosol	34.43	36.62
CDX93218	Canola	peroxisome	33.81	36.36
EER87685	Sorghum	mitochondrion	34.43	36.23
Os11t0244100-00	Rice	mitochondrion	35.46	35.98
GSMUA_Achr5P06650_001	Banana	cytosol	33.61	35.59
TraesCS7D01G531500.1	Wheat	mitochondrion	34.85	35.58
OQU91799	Sorghum	mitochondrion	34.43	35.46
Os06t0103200-01	Rice	mitochondrion	33.61	35.36
GSMUA_Achr7P13950_001	Banana	plastid	32.99	35.01
CDY17759	Canola	cytosol	5.77	35.0
TraesCS7D01G003400.1	Wheat	plastid	33.81	34.89
TraesCS4A01G495900.1	Wheat	plastid	34.02	34.81
Os07t0142700-00	Rice	plastid	33.81	34.53
TraesCS4A01G426400.1	Wheat	cytosol	25.15	34.46
Zm00001d035865_P001	Maize	mitochondrion	33.61	34.32
TraesCS7A01G002700.1	Wheat	plastid	33.4	34.11
HORVU7Hr1G000970.1	Barley	plastid	34.85	34.07
TraesCS4A01G401500.1	Wheat	plastid	33.4	33.89
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	32.58	33.69
TraesCS3D01G128500.1	Wheat	mitochondrion	32.37	33.48
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	34.85	33.47
TraesCS3A01G127300.1	Wheat	plastid	32.16	33.26
TraesCS7D01G057300.1	Wheat	mitochondrion	32.16	33.19
CDX77413	Canola	cytosol, plastid	21.86	33.12
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	34.64	33.07
EER87684	Sorghum	plastid	32.78	32.25
CDY39539	Canola	cytosol, plastid	29.9	32.08
CDX83118	Canola	mitochondrion, plastid	29.69	32.07
HORVU3Hr1G023780.1	Barley	plastid	31.75	31.69
CDY01434	Canola	cytosol	29.07	31.69
CDY18724	Canola	cytosol	27.84	31.62
CDX68582	Canola	mitochondrion	9.48	31.29
CDY32573	Canola	cytosol	23.51	30.65
CDY12812	Canola	cytosol	18.14	30.45
CDX74510	Canola	cytosol	28.04	30.36
CDY07540	Canola	cytosol	27.84	30.27
CDY30596	Canola	extracellular	16.7	30.22
CDY01691	Canola	plastid	27.22	30.21
CDY12811	Canola	extracellular	29.28	30.02
CDY01433	Canola	cytosol	27.01	29.98
CDY40431	Canola	cytosol	27.63	29.78
CDY18638	Canola	cytosol	27.42	29.42
CDY47454	Canola	cytosol	27.63	29.26
CDX80398	Canola	cytosol	27.63	28.88
CDX81339	Canola	cytosol	26.8	28.76
CDY47247	Canola	plasma membrane	21.65	28.46
CDY04024	Canola	cytosol	9.28	28.3
CDX88059	Canola	cytosol	27.42	28.3
CDX83119	Canola	cytosol	10.52	28.18
CDX74540	Canola	cytosol	23.3	27.9
CDY44265	Canola	cytosol	26.8	27.66
CDX97348	Canola	cytosol	9.9	20.17
CDY61372	Canola	cytosol	9.9	19.83
CDY66079	Canola	cytosol	5.36	14.29

Protein Annotations

EnsemblPlants:CDY40771	EnsemblPlantsGene:GSBRNA2T00071672001	Gene3D:3.30.559.10	GO:A0A078HSQ6	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF6	PFAM:PF02458	ProteinID:CDY40771	ProteinID:CDY40771.1	SEG:seg	SUPFAM:SSF52777
UniParc:UPI0004EF1709	UniProt:A0A078HSQ6	MapMan:35.1	:	:	:

Description

BnaAnng06340DBnaAnng06340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSQ6]

Coordinates

chrLK032478:-:183720..185285

Molecular Weight (calculated)

53987.4 Da

IEP (calculated)

8.374

GRAVY (calculated)

-0.271

Length

485 amino acids

Sequence
(BLAST)

001: MKQPLIIIIR SINFSRVNKE RNKRDIERNK RSKMVSSASS SEAKIISQCF VKPKTVSETS KDPYNLSPMD HVMLSFQYIQ KGLLFLKPSD GAIKPQDFME
101: TLLQKLKDSL ATALVHFYLL SGRLSTSVTD DASSYSVFVD CNNSSGAGFI HAKSDLSVGD IVGSKYVPLV VQSFFDHHNE VKAKVTELVD GVFVGLSMNH
201: SIGDGVSFWH FFNSLSEIFS SQETIDNNIK LFCLKNPPIL RQVSTGSVYS LPFSESPKSN PQFQTQVLQE RMLHFSSEAV RSLKSKANQE SGTTTMISSL
301: QSLTAFIWRS ITRARKLQSD QETTCRFVAD SRPRMVPPLP MNYFGVYISL VKTTAKVGNL LENEFGWAAS KLHHVVVEHT GEKICSEMKR RFNPPCALPS
401: ETFYDPTIVH MGNSPRYDNY GCQFGMGKAV AVRSGNNDKY DGKVSAYPGR EGGGSIDLEV CLLPEFMEAL ESDQEFMSPV SPSSG

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.