Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97348 | Canola | cytosol | 89.01 | 68.07 |
| CDY61372 | Canola | cytosol | 90.11 | 67.77 |
| CDY17759 | Canola | cytosol | 7.69 | 17.5 |
| CDY14025 | Canola | extracellular | 14.29 | 17.11 |
| CDY40314 | Canola | cytosol | 19.23 | 7.68 |
| CDY30596 | Canola | extracellular | 10.44 | 7.09 |
| CDX74815 | Canola | cytosol, plastid | 16.48 | 6.91 |
| CDY48117 | Canola | endoplasmic reticulum, nucleus, peroxisome | 18.68 | 6.73 |
| CDX71519 | Canola | cytosol, nucleus, plastid | 16.48 | 6.68 |
| CDY07045 | Canola | peroxisome | 16.48 | 6.67 |
| CDY12812 | Canola | cytosol | 10.44 | 6.57 |
| CDY24938 | Canola | cytosol, plastid | 16.48 | 6.54 |
| CDY55902 | Canola | endoplasmic reticulum, nucleus, peroxisome | 18.13 | 6.5 |
| CDY02424 | Canola | cytosol | 15.93 | 6.46 |
| CDY21238 | Canola | cytosol | 15.93 | 6.46 |
| CDX93218 | Canola | peroxisome | 15.93 | 6.43 |
| CDX81074 | Canola | plastid | 15.93 | 6.3 |
| CDX81073 | Canola | cytosol | 15.38 | 6.07 |
| CDX78313 | Canola | cytosol | 15.38 | 5.94 |
| CDY14027 | Canola | cytosol, nucleus, plastid | 12.64 | 5.6 |
| CDY40772 | Canola | cytosol, nucleus, plastid | 12.64 | 5.57 |
| CDY40771 | Canola | cytosol | 14.29 | 5.36 |
| CDY40431 | Canola | cytosol | 12.09 | 4.89 |
| CDY47247 | Canola | plasma membrane | 9.89 | 4.88 |
| CDX83118 | Canola | mitochondrion, plastid | 10.99 | 4.45 |
| CDY18724 | Canola | cytosol | 10.44 | 4.45 |
| CDY44265 | Canola | cytosol | 10.99 | 4.26 |
| CDY47454 | Canola | cytosol | 10.44 | 4.15 |
| CDY01433 | Canola | cytosol | 9.89 | 4.12 |
| CDY01434 | Canola | cytosol | 9.89 | 4.04 |
| CDX74510 | Canola | cytosol | 9.89 | 4.02 |
| CDY39539 | Canola | cytosol, plastid | 9.89 | 3.98 |
| CDX80398 | Canola | cytosol | 9.89 | 3.88 |
| CDX88059 | Canola | cytosol | 9.89 | 3.83 |
| CDY07540 | Canola | cytosol | 9.34 | 3.81 |
| CDY12811 | Canola | extracellular | 9.89 | 3.81 |
| CDY01691 | Canola | plastid | 8.24 | 3.43 |
| CDY18638 | Canola | cytosol | 8.24 | 3.32 |
| CDX81339 | Canola | cytosol | 8.24 | 3.32 |
| CDX74540 | Canola | cytosol | 7.14 | 3.21 |
| CDY32573 | Canola | cytosol | 3.85 | 1.88 |
| CDY04024 | Canola | cytosol | 0.55 | 0.63 |
| CDX77413 | Canola | cytosol, plastid | 1.1 | 0.62 |
| CDX83119 | Canola | cytosol | 0.55 | 0.55 |
| CDY14026 | Canola | cytosol | 0.0 | 0.0 |
| CDX68582 | Canola | mitochondrion | 0.0 | 0.0 |
| VIT_00s0410g00040.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_02s0109g00390.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY66079 | EnsemblPlantsGene:GSBRNA2T00051282001 | ProteinID:CDY66079 | ProteinID:CDY66079.1 | SEG:seg | UniParc:UPI0004EE4B18 |
| UniProt:A0A078JH99 | MapMan:35.2 | : | : | : | : |
Description
BnaAnng21470DBnaAnng21470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH99]
Coordinates
chrLK035068:+:11410..12433
Molecular Weight (calculated)
20062.9 Da
IEP (calculated)
9.905
GRAVY (calculated)
-0.619
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAGDLLAN DLRCGGANKF DGKISAFPGK EGNRSHEKLA DEGRNVFAGR ENVGDDDVFG GSGDKINSGV VAGRSETERR RSATVDFFSG YTMHLEIISL
101: HHYLLLDRKG SEKGTAKTSK PLVKGFVHDK DDEVMKITKV LKNKRGGDPL FREIHMSRLD QAGMIYTPWL SHCQGLKKRV AR
101: HHYLLLDRKG SEKGTAKTSK PLVKGFVHDK DDEVMKITKV LKNKRGGDPL FREIHMSRLD QAGMIYTPWL SHCQGLKKRV AR
001: MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF
Arabidopsis Description
PAO5Probable polyamine oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU79]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.