Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97348 | Canola | cytosol | 93.39 | 94.96 |
| CDY66079 | Canola | cytosol | 67.77 | 90.11 |
| CDY17759 | Canola | cytosol | 12.81 | 38.75 |
| CDY14025 | Canola | extracellular | 19.42 | 30.92 |
| CDY40314 | Canola | cytosol | 40.08 | 21.27 |
| CDY48117 | Canola | endoplasmic reticulum, nucleus, peroxisome | 38.84 | 18.61 |
| CDY55902 | Canola | endoplasmic reticulum, nucleus, peroxisome | 38.43 | 18.31 |
| CDX74815 | Canola | cytosol, plastid | 32.64 | 18.2 |
| CDY07045 | Canola | peroxisome | 32.23 | 17.33 |
| CDX93218 | Canola | peroxisome | 30.99 | 16.63 |
| CDY24938 | Canola | cytosol, plastid | 31.41 | 16.56 |
| CDY30596 | Canola | extracellular | 18.18 | 16.42 |
| CDY12812 | Canola | cytosol | 14.88 | 12.46 |
| CDY47247 | Canola | plasma membrane | 18.18 | 11.92 |
| CDX71519 | Canola | cytosol, nucleus, plastid | 21.49 | 11.58 |
| CDX81074 | Canola | plastid | 21.9 | 11.52 |
| CDY21238 | Canola | cytosol | 21.07 | 11.36 |
| CDY02424 | Canola | cytosol | 20.66 | 11.14 |
| CDX81073 | Canola | cytosol | 21.07 | 11.06 |
| CDX78313 | Canola | cytosol | 20.66 | 10.62 |
| CDY40431 | Canola | cytosol | 19.01 | 10.22 |
| CDX83118 | Canola | mitochondrion, plastid | 18.59 | 10.02 |
| CDY44265 | Canola | cytosol | 19.42 | 10.0 |
| CDY40771 | Canola | cytosol | 19.83 | 9.9 |
| CDY01434 | Canola | cytosol | 17.77 | 9.66 |
| CDX88059 | Canola | cytosol | 18.59 | 9.57 |
| CDX80398 | Canola | cytosol | 18.18 | 9.48 |
| CDY07540 | Canola | cytosol | 16.94 | 9.19 |
| CDX74510 | Canola | cytosol | 16.94 | 9.15 |
| CDX74540 | Canola | cytosol | 15.29 | 9.14 |
| CDY18724 | Canola | cytosol | 16.12 | 9.13 |
| CDY14027 | Canola | cytosol, nucleus, plastid | 15.29 | 9.0 |
| CDY40772 | Canola | cytosol, nucleus, plastid | 15.29 | 8.96 |
| CDY12811 | Canola | extracellular | 17.36 | 8.88 |
| CDY39539 | Canola | cytosol, plastid | 16.53 | 8.85 |
| CDY47454 | Canola | cytosol | 16.53 | 8.73 |
| CDY01433 | Canola | cytosol | 14.46 | 8.01 |
| CDY01691 | Canola | plastid | 14.05 | 7.78 |
| CDX81339 | Canola | cytosol | 14.46 | 7.74 |
| CDY18638 | Canola | cytosol | 13.64 | 7.3 |
| CDY32573 | Canola | cytosol | 5.79 | 3.76 |
| CDY14026 | Canola | cytosol | 0.83 | 0.78 |
| CDY04024 | Canola | cytosol | 0.41 | 0.63 |
| CDX77413 | Canola | cytosol, plastid | 0.83 | 0.62 |
| CDX83119 | Canola | cytosol | 0.41 | 0.55 |
| CDX68582 | Canola | mitochondrion | 0.0 | 0.0 |
| VIT_00s0410g00040.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_02s0109g00390.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY61372 | EnsemblPlantsGene:GSBRNA2T00033756001 | Gene3D:3.30.559.10 | GO:A0A078JBF2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016740 | GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31896 |
| PANTHER:PTHR31896:SF5 | PFAM:PF02458 | ProteinID:CDY61372 | ProteinID:CDY61372.1 | SEG:seg | UniParc:UPI0004EE9836 |
| UniProt:A0A078JBF2 | MapMan:35.2 | : | : | : | : |
Description
BnaC05g49830DBnaC05g49830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBF2]
Coordinates
chrLK033990:-:6787..7690
Molecular Weight (calculated)
26741.5 Da
IEP (calculated)
7.297
GRAVY (calculated)
-0.571
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAGDLLAN DLRWSADQLH RNVVAHDDAT FRRGIADWES NPRLFPLGNA DGEMGSSPRF PMYDNDFGWG KPLAVRSGGA NKFDGKISAF PGKEKLAVEE
101: RNIFAGRENV GDDDVFGGSG DKISSGVVAG RSETERRRSA TVDFFSGYTM HLEIISLHHY LLLDKKGSEK GTAKTSKPLV KGFVHDNDDE VMKITKVLKN
201: KRGGDPLFSE IHMSRLDQAG MIYTPWLSHC QGLKKEWPGQ LS
101: RNIFAGRENV GDDDVFGGSG DKISSGVVAG RSETERRRSA TVDFFSGYTM HLEIISLHHY LLLDKKGSEK GTAKTSKPLV KGFVHDNDDE VMKITKVLKN
201: KRGGDPLFSE IHMSRLDQAG MIYTPWLSHC QGLKKEWPGQ LS
001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC
Arabidopsis Description
AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.