Factsheet for HORVU3Hr1G023780.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G128500.1	Wheat	mitochondrion	90.74	94.03
TraesCS3A01G127300.1	Wheat	plastid	90.53	93.82
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	90.53	93.82
OQU91799	Sorghum	mitochondrion	62.55	64.54
Os11t0244100-00	Rice	mitochondrion	62.96	64.02
Os06t0103200-01	Rice	mitochondrion	60.7	63.99
EER87685	Sorghum	mitochondrion	59.67	62.91
HORVU7Hr1G000970.1	Barley	plastid	64.2	62.9
Os07t0142700-00	Rice	plastid	60.7	62.11
Zm00001d035865_P001	Maize	mitochondrion	56.17	57.47
EER87684	Sorghum	plastid	57.41	56.59
GSMUA_Achr7P13950_001	Banana	plastid	42.18	44.86
HORVU2Hr1G006460.1	Barley	mitochondrion	9.26	42.86
GSMUA_Achr5P06650_001	Banana	cytosol	39.51	41.92
KRH40990	Soybean	extracellular	25.51	40.66
VIT_18s0001g10240.t01	Wine grape	cytosol	10.91	39.26
KRH52020	Soybean	cytosol	36.83	39.25
VIT_18s0001g10180.t01	Wine grape	cytosol	36.63	39.21
KRH40991	Soybean	cytosol	33.13	39.17
Bra035334.1-P	Field mustard	cytosol	36.01	38.98
CDY02424	Canola	cytosol	36.01	38.98
Bra028682.1-P	Field mustard	cytosol	31.28	38.97
AT5G42830.1	Thale cress	cytosol	35.8	38.67
CDY21238	Canola	cytosol	35.6	38.53
KRH61317	Soybean	vacuole	31.89	38.27
KRH52019	Soybean	cytosol	35.8	38.07
KRH61321	Soybean	cytosol	36.01	38.04
KRH61316	Soybean	cytosol	36.01	37.96
Solyc04g078660.1.1	Tomato	cytosol	34.77	37.72
KRH61319	Soybean	cytosol, mitochondrion, nucleus	36.21	37.53
CDY14027	Canola	cytosol, nucleus, plastid	31.69	37.47
KRH61322	Soybean	cytosol	23.87	37.3
CDY40772	Canola	cytosol, nucleus, plastid	31.69	37.29
HORVU2Hr1G005310.2	Barley	cytosol	35.19	37.25
VIT_18s0001g10230.t01	Wine grape	cytosol	25.51	37.24
AT5G07860.1	Thale cress	cytosol	34.77	37.22
HORVU1Hr1G072050.3	Barley	cytosol	35.8	37.02
KRH61619	Soybean	cytosol	34.98	36.96
HORVU7Hr1G076490.1	Barley	cytosol	35.8	36.94
HORVU2Hr1G012940.1	Barley	cytosol	14.81	36.92
PGSC0003DMT400020526	Potato	cytosol	34.57	36.92
PGSC0003DMT400084781	Potato	cytosol	34.16	36.89
HORVU5Hr1G118600.1	Barley	mitochondrion	34.98	36.88
AT5G07850.1	Thale cress	cytosol	34.57	36.84
CDX71519	Canola	cytosol, nucleus, plastid	33.95	36.75
HORVU2Hr1G005330.5	Barley	cytosol	34.77	36.42
HORVU2Hr1G005350.1	Barley	cytosol	34.77	36.42
Solyc04g078350.1.1	Tomato	cytosol	12.35	36.36
VIT_18s0001g10200.t01	Wine grape	cytosol	23.66	36.28
CDX81073	Canola	cytosol	33.95	35.79
HORVU1Hr1G080540.1	Barley	cytosol	19.34	35.74
AT5G07870.1	Thale cress	cytosol	33.74	35.34
KRH61320	Soybean	cytosol, plastid	34.98	34.98
CDX81074	Canola	plastid	32.92	34.78
CDX78313	Canola	cytosol	33.54	34.61
HORVU2Hr1G006540.2	Barley	mitochondrion	34.16	34.58
Bra028681.1-P	Field mustard	cytosol	31.69	33.92
HORVU1Hr1G075900.1	Barley	cytosol	30.45	32.96
CDY40771	Canola	cytosol	31.69	31.75
HORVU3Hr1G085100.2	Barley	plastid	34.36	31.27
HORVU1Hr1G073330.1	Barley	cytosol	35.8	31.24
CDY14026	Canola	cytosol	14.61	27.73

Protein Annotations

EnsemblPlants:HORVU3Hr1G023780.1	EnsemblPlantsGene:HORVU3Hr1G023780	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF14
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	UniParc:UPI000B47DC65	UniProt:A0A287KFL0	MapMan:35.1

Description

No Description!

Coordinates

chrchr3H:+:88690770..88692993

Molecular Weight (calculated)

51264.7 Da

IEP (calculated)

6.921

GRAVY (calculated)

-0.031

Length

486 amino acids

Sequence
(BLAST)

001: ELGHLHSQPA SRQADSAMPP PSPVRVVSSR TVKPPARPRE RIPFASWDVS MINANYIQKG LLFPAPPPPF STGAAVTSHL ADALAQALGG GYHPVAGRFV
101: TDRHRDHSGA VVGCSVSIDC DGQGVEVVHA VADGVAWADV VPPDADVPSV VEDFFPLNDA INYDGHELPL FAAQVTELAD GSVFVGFVCN HALADGTAFW
201: IFLKALAEIS RARLAPPGAP HSLTSSPRPL FERWSPDGGT AAPVVLPCKD LSELIERPAR VPLRGRVLHF SAESMAALKE QAREELLAAG DAAGAAALTR
301: YQALTSLIWR CITRARRLAP DDETAFRGAA SNRGRLRPAL PAEYFGNSLY AVSTEPVRVS ELLAHGGHGR AAAAVGRAVA ANTDASIRAR VAAWTAHPVV
401: TVRLTMMGGS PWFDAYGCDF GWGKPAAVRS GRANKNDGRT VLYPGWEGGG SVDAEVSLSP GHMAALELDG ELRAAVSSSR ATFVSL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.