Factsheet for TraesCS2B01G055400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G012940.1	Barley	cytosol	40.72	75.38
TraesCS2D01G041900.1	Wheat	cytosol	90.86	70.24
TraesCS2A01G042800.1	Wheat	cytosol	90.3	69.81
TraesCS7B01G451000.1	Wheat	cytosol	80.61	64.52
HORVU2Hr1G006540.2	Barley	mitochondrion	70.36	52.92
TraesCS2B01G490200.1	Wheat	mitochondrion	67.59	52.03
TraesCS1B01G373200.1	Wheat	cytosol	63.16	50.78
TraesCS4B01G336000.1	Wheat	mitochondrion	63.16	49.35
TraesCS5B01G519900.1	Wheat	cytosol, mitochondrion	62.6	48.92
TraesCS4B01G335900.1	Wheat	cytosol	62.33	47.97
TraesCS7B01G221000.1	Wheat	cytosol	61.5	47.84
EES13245	Sorghum	cytosol	61.22	46.72
KXG24241	Sorghum	cytosol	59.0	46.0
Zm00001d035064_P001	Maize	cytosol	61.77	45.79
TraesCS2B01G048600.1	Wheat	cytosol	56.51	44.84
TraesCS2B01G586200.1	Wheat	cytosol	56.23	44.62
TraesCS2B01G048900.1	Wheat	cytosol	57.62	43.97
TraesCS2B01G018300.1	Wheat	cytosol	53.19	43.74
TraesCS1B01G295900.1	Wheat	cytosol	55.96	43.53
TraesCS1B01G295800.1	Wheat	cytosol	54.57	42.64
TraesCS1B01G052500.1	Wheat	cytosol, plastid	54.29	41.97
TraesCS2B01G049100.1	Wheat	cytosol	58.45	41.62
TraesCS7B01G414500.1	Wheat	cytosol	9.97	39.13
TraesCS2B01G048800.1	Wheat	peroxisome	32.69	37.58
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	40.44	31.13
Zm00001d035057_P001	Maize	extracellular	60.39	29.42
TraesCS1B01G354000.1	Wheat	cytosol	31.86	25.78
TraesCS3B01G399600.1	Wheat	plastid	34.07	25.0
TraesCS1B01G287800.1	Wheat	cytosol, plastid	34.63	23.72

Protein Annotations

EnsemblPlants:TraesCS2B01G055400.1	EnsemblPlantsGene:TraesCS2B01G055400	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF9
PFAM:PF02458	SEG:seg	MapMan:50.2.3	:	:	:

Description

No Description!

Coordinates

chr2B:+:27010387..27011558

Molecular Weight (calculated)

38562.0 Da

IEP (calculated)

7.385

GRAVY (calculated)

0.026

Length

361 amino acids

Sequence
(BLAST)

001: MEGAEFVHAV APGVTVADVT APLYTPMLVR SFFPLDGLHG VDAAAGSHPL LAVQVTELAD GVFVGMSLNH AVADGSALWH LFNTWSEISR QSDGADISSP
101: LPVHRRWFLD GCPVPIPLPF GKLEDIPVSR RTADEHPSSV KVECFLNFSA EMVKKLKAKA NAEMSGTSNG TTTISSLQAL LAHLWWIAVT RARRLAPDHR
201: TTYVILVGCR GRVDGLPAAY AGNAVARAEA VSTAGEILQR GLGWTGSLLN RAVASFDVAT QRDRHASWPQ EHYFLRARPT ATAKMVTGGS PRFDVYGNDF
301: GWGRPVGVRS GRANKMGGTA TVFEGRDGGG SMALGVWLSP EVLARLVADE EFMSAVSTVT A

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.