Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G050010.1 | Barley | cytosol | 66.06 | 68.12 |
| HORVU5Hr1G070330.1 | Barley | cytosol, extracellular | 64.85 | 66.88 |
| HORVU3Hr1G061440.1 | Barley | extracellular | 34.55 | 33.93 |
| HORVU0Hr1G031790.1 | Barley | cytosol | 46.06 | 22.75 |
| HORVU4Hr1G006540.1 | Barley | extracellular | 44.85 | 21.96 |
| HORVU2Hr1G055170.1 | Barley | cytosol, mitochondrion, vacuole | 48.48 | 21.16 |
| HORVU6Hr1G018240.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 51.52 | 20.09 |
| HORVU4Hr1G080720.1 | Barley | vacuole | 53.94 | 18.94 |
| TraesCS7D01G441600.1 | Wheat | cytosol, plasma membrane | 51.52 | 18.16 |
| HORVU6Hr1G024660.4 | Barley | extracellular, plasma membrane | 56.36 | 13.08 |
| HORVU6Hr1G023210.3 | Barley | extracellular, plasma membrane | 56.36 | 12.16 |
| HORVU6Hr1G031910.6 | Barley | endoplasmic reticulum, vacuole | 56.97 | 12.08 |
| HORVU0Hr1G015280.1 | Barley | plasma membrane | 64.24 | 11.7 |
| HORVU4Hr1G006450.1 | Barley | cytosol | 47.88 | 11.3 |
| HORVU6Hr1G024860.15 | Barley | extracellular, plasma membrane, vacuole | 54.55 | 10.56 |
| HORVU6Hr1G023730.2 | Barley | plasma membrane | 64.85 | 10.41 |
| HORVU6Hr1G023340.1 | Barley | plasma membrane | 66.06 | 10.32 |
| HORVU6Hr1G023290.1 | Barley | plasma membrane | 62.42 | 9.63 |
| Os02t0153700-01 | Rice | plasma membrane | 56.97 | 8.98 |
| HORVU6Hr1G023100.9 | Barley | plasma membrane | 56.97 | 8.86 |
| Os02t0154000-00 | Rice | plasma membrane | 55.76 | 8.8 |
| HORVU6Hr1G023770.2 | Barley | plasma membrane | 56.36 | 8.73 |
| HORVU6Hr1G023090.1 | Barley | plasma membrane, plastid | 56.36 | 8.67 |
| CDY48482 | Canola | plasma membrane | 35.15 | 8.44 |
| HORVU6Hr1G024800.2 | Barley | cytosol, plasma membrane | 39.39 | 8.17 |
| HORVU7Hr1G099550.1 | Barley | plasma membrane, plastid | 54.55 | 8.12 |
| AT1G17240.2 | Thale cress | plasma membrane | 35.76 | 8.04 |
| AT1G17250.1 | Thale cress | plasma membrane | 34.55 | 7.54 |
| HORVU7Hr1G102080.4 | Barley | cytosol, plastid | 18.79 | 7.06 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 28.48 | 6.89 |
| CDX81812 | Canola | extracellular, plasma membrane | 22.42 | 6.88 |
| KRH68996 | Soybean | plasma membrane | 40.0 | 6.67 |
| KRH06301 | Soybean | plasma membrane | 42.42 | 6.57 |
| HORVU7Hr1G099520.1 | Barley | plasma membrane | 42.42 | 6.46 |
| KRH47735 | Soybean | plasma membrane | 38.79 | 6.45 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 26.67 | 6.45 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 26.67 | 6.45 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 41.82 | 6.4 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 32.73 | 5.83 |
| Bra016068.1-P | Field mustard | plasma membrane | 37.58 | 5.7 |
| CDX96394 | Canola | plasma membrane | 37.58 | 5.7 |
| AT1G72300.1 | Thale cress | plasma membrane | 36.97 | 5.57 |
| CDX82157 | Canola | plasma membrane | 35.76 | 5.48 |
| Bra008027.1-P | Field mustard | plasma membrane | 35.76 | 5.48 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 35.76 | 5.42 |
| HORVU6Hr1G009270.1 | Barley | plasma membrane | 33.33 | 5.04 |
| HORVU6Hr1G058960.1 | Barley | plasma membrane | 31.52 | 4.94 |
| HORVU6Hr1G022420.10 | Barley | cytosol | 7.27 | 4.05 |
| CDY03644 | Canola | plasma membrane | 17.58 | 3.36 |
| HORVU4Hr1G023740.3 | Barley | plastid | 10.3 | 2.21 |
| HORVU2Hr1G120830.2 | Barley | plasma membrane | 13.94 | 2.21 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 1.82 | 2.21 |
| HORVU6Hr1G024590.1 | Barley | cytosol, golgi, peroxisome | 3.64 | 2.15 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 3.64 | 2.08 |
| HORVU7Hr1G094290.1 | Barley | plasma membrane | 2.42 | 1.61 |
| HORVU6Hr1G059580.1 | Barley | plasma membrane | 5.45 | 1.59 |
| HORVU6Hr1G023370.1 | Barley | cytosol | 2.42 | 0.89 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
| HORVU6Hr1G009120.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G046130.1 | EnsemblPlantsGene:HORVU2Hr1G046130 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF7 |
| PFAM:PF00560 | SEG:seg | SUPFAM:SSF52058 | UniParc:UPI000B46BFD3 | UniProt:A0A287HWM4 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr2H:-:244408681..244409178
Molecular Weight (calculated)
17431.8 Da
IEP (calculated)
6.375
GRAVY (calculated)
0.160
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MGERHGCSKW EGITCGQDRT ITHVLWPFKG LEGNISRSLG ILDALQHLDI SHNSLSSGLP SELVSSSSIT ILDVSFNHLN GTLHELPSSA LPQTLQVLNI
101: SSNLFIGHFP SITMGNLVTL NASNNSFTGQ IPTQLCSTSP PSLCLNCVST NSVAASPQVL VIAPG
101: SSNLFIGHFP SITMGNLVTL NASNNSFTGQ IPTQLCSTSP PSLCLNCVST NSVAASPQVL VIAPG
001: MTNEGRFKAK GFVRTSSTTR PIQALSFHMI GILLQCVLFI SVLSIAVSEA LCNSQDRESL LWFSGNVSSS VSPLNWNPSI DCCSWEGITC DDSPDSHITA
101: ISLPFRALYG KLPLSVLRLH HLSQLNLSHN RLSGHLPSGF LSALDQLKVL DLSYNSLDGE LPVEQTFRNG SNRCFPIRIV DLSSNFLQGE ILPSSIFMQG
201: TFDLISFNVS KNSFTGSIPS FMCKSSPQLS KLDFSYNDFT GNIPQGLGRC LKLSVLQAGF NNISGEIPSD IYNLSELEQL FLPVNHLSGK INDDITHLTK
301: LKSLELYSNH LGGEIPMDIG QLSRLQSLQL HINNITGTVP PSLANCTNLV KLNLRLNRLE GTLSELDFSR FQSLSILDLG NNSFSGDFPW RVHSCKSLSA
401: MRFASNKLTG QISPHVLELE SLSILSLSDN KLMNITGALG ILQGCRNLST LLIGKNFYNE TFPSDKDLIS SDGFPNLQIF ASGGSGLRGE IPAWLIKLKS
501: LAVIDLSHNQ LVGSIPGWLG TFPHLFYIDL SENLLSGELP KDLFQLKALM SQKAYDATER NYLKLPVFVS PNNVTTHQQY NQLFSLPPGI YIRRNNLKGS
601: IPIEVGQLKV LHVLELSHNY LSGIIPHELS KLTSLERLDL SNNHLSGRIP WSLTSLHYMS YFNVVNNSLD GPIPTGSQFD TFPQANFKGN PLLCGGILLT
701: SCKASTKLPA TTTNKADTED EEELKFIFIL GVATGFFVSY CFYWCFFARL DAFISK
101: ISLPFRALYG KLPLSVLRLH HLSQLNLSHN RLSGHLPSGF LSALDQLKVL DLSYNSLDGE LPVEQTFRNG SNRCFPIRIV DLSSNFLQGE ILPSSIFMQG
201: TFDLISFNVS KNSFTGSIPS FMCKSSPQLS KLDFSYNDFT GNIPQGLGRC LKLSVLQAGF NNISGEIPSD IYNLSELEQL FLPVNHLSGK INDDITHLTK
301: LKSLELYSNH LGGEIPMDIG QLSRLQSLQL HINNITGTVP PSLANCTNLV KLNLRLNRLE GTLSELDFSR FQSLSILDLG NNSFSGDFPW RVHSCKSLSA
401: MRFASNKLTG QISPHVLELE SLSILSLSDN KLMNITGALG ILQGCRNLST LLIGKNFYNE TFPSDKDLIS SDGFPNLQIF ASGGSGLRGE IPAWLIKLKS
501: LAVIDLSHNQ LVGSIPGWLG TFPHLFYIDL SENLLSGELP KDLFQLKALM SQKAYDATER NYLKLPVFVS PNNVTTHQQY NQLFSLPPGI YIRRNNLKGS
601: IPIEVGQLKV LHVLELSHNY LSGIIPHELS KLTSLERLDL SNNHLSGRIP WSLTSLHYMS YFNVVNNSLD GPIPTGSQFD TFPQANFKGN PLLCGGILLT
701: SCKASTKLPA TTTNKADTED EEELKFIFIL GVATGFFVSY CFYWCFFARL DAFISK
Arabidopsis Description
AtRLP3RLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WD64]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.