CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96780	Canola	mitochondrion, plasma membrane	95.45	95.45
AT1G17250.1	Thale cress	plasma membrane	78.74	71.03
CDX81812	Canola	extracellular, plasma membrane	46.48	58.92
CDY48482	Canola	plasma membrane	55.28	54.88
HORVU7Hr1G102080.4	Barley	cytosol, plastid	27.57	42.82
CDX82157	Canola	plasma membrane	64.96	41.13
CDX96394	Canola	plasma membrane	64.81	40.62
TraesCS6D01G081500.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	28.74	40.5
TraesCS6B01G155700.1	Wheat	cytosol, golgi, plasma membrane, plastid	21.7	40.44
CDY04712	Canola	cytosol	8.8	39.74
TraesCS6B01G154600.1	Wheat	cytosol, golgi, plasma membrane	26.39	39.74
TraesCS6B01G155300.1	Wheat	cytosol, golgi, plasma membrane	23.46	39.6
TraesCS6A01G128500.1	Wheat	extracellular	25.81	39.46
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	27.13	39.36
TraesCS6D01G117600.1	Wheat	cytosol, golgi, peroxisome	37.98	39.24
TraesCS6D01G119100.1	Wheat	cytosol, golgi, peroxisome	23.02	39.05
TraesCS6B01G154200.1	Wheat	vacuole	27.71	38.97
CDY03644	Canola	plasma membrane	49.12	38.82
TraesCS6B01G157800.1	Wheat	cytosol	23.17	38.73
TraesCS6D01G116600.1	Wheat	plastid	32.55	38.54
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	8.8	38.46
TraesCS6D01G116900.1	Wheat	extracellular, plasma membrane	39.0	38.27
EES06299	Sorghum	plasma membrane	39.88	38.2
TraesCS6D01G116700.1	Wheat	plasma membrane	40.18	38.16
HORVU6Hr1G024590.1	Barley	cytosol, golgi, peroxisome	15.54	37.99
TraesCS6A01G128300.1	Wheat	cytosol	15.54	37.99
TraesCS6B01G154700.1	Wheat	extracellular	38.71	37.99
TraesCS6B01G145300.1	Wheat	mitochondrion	39.88	37.83
TraesCS6A01G127400.1	Wheat	extracellular, plasma membrane, vacuole	39.59	37.76
OQU84395	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	39.59	37.55
TraesCS6B01G155600.1	Wheat	vacuole	39.3	37.48
TraesCS6A01G126200.1	Wheat	plasma membrane	39.3	37.43
OQU84402	Sorghum	endoplasmic reticulum, vacuole	28.01	37.38
TraesCS6D01G115800.1	Wheat	plasma membrane	40.47	37.15
TraesCS7B01G352400.1	Wheat	mitochondrion	35.48	37.12
TraesCS6A01G127300.1	Wheat	extracellular, plasma membrane, vacuole	39.0	37.1
TraesCS6A01G130000.1	Wheat	cytosol, golgi, peroxisome	35.92	37.07
TraesCS6D01G117200.1	Wheat	plasma membrane	37.98	37.05
Os02t0156400-01	Rice	cytosol, mitochondrion, plasma membrane, vacuole	39.0	37.05
Os02t0155400-01	Rice	plasma membrane	39.44	37.0
TraesCS6A01G128400.1	Wheat	plasma membrane	38.42	36.85
Os02t0157501-00	Rice	cytosol	9.82	36.81
OQU84393	Sorghum	plasma membrane	38.56	36.73
TraesCS6A01G126400.1	Wheat	plasma membrane	39.0	36.69
TraesCS6A01G127500.1	Wheat	plasma membrane	38.56	36.63
TraesCS6B01G155000.1	Wheat	plasma membrane	37.54	36.62
Os02t0156600-00	Rice	plasma membrane	38.12	36.62
TraesCS7D01G401700.1	Wheat	golgi, vacuole	34.02	36.59
TraesCS6A01G129900.1	Wheat	extracellular, plasma membrane	38.27	36.55
Os02t0156633-00	Rice	mitochondrion	36.8	36.54
TraesCS6D01G119400.1	Wheat	plastid	38.56	36.48
TraesCS6D01G117900.1	Wheat	plasma membrane, vacuole	25.07	36.46
EES08691	Sorghum	plasma membrane	38.86	36.3
Os02t0157200-00	Rice	plasma membrane	38.12	36.21
TraesCS4A01G273300.1	Wheat	cytosol, plasma membrane, plastid	34.9	36.17
TraesCS6D01G117400.1	Wheat	plasma membrane, vacuole	37.68	36.15
TraesCS7D01G441600.1	Wheat	cytosol, plasma membrane	24.78	36.11
TraesCS6D01G116500.1	Wheat	plasma membrane	37.68	36.1
TraesCS7A01G452500.1	Wheat	plasma membrane	38.27	36.05
EES06300	Sorghum	plasma membrane	37.83	36.03
TraesCS6B01G154300.1	Wheat	plasma membrane, vacuole	37.83	36.03
HORVU6Hr1G024660.4	Barley	extracellular, plasma membrane	37.54	36.01
TraesCS6A01G128100.1	Wheat	plasma membrane	37.54	36.01
TraesCS6D01G118000.1	Wheat	plastid	39.0	35.99
TraesCS6B01G158200.1	Wheat	extracellular, plasma membrane, vacuole	37.54	35.9
TraesCS6D01G119600.1	Wheat	plasma membrane	37.54	35.9
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	37.39	35.87
TraesCS6A01G130200.1	Wheat	extracellular	37.24	35.83
TraesCS6D01G119500.1	Wheat	extracellular, plasma membrane, vacuole	37.39	35.81
EES06303	Sorghum	plasma membrane	38.56	35.78
KXG29504	Sorghum	plasma membrane	31.52	35.77
TraesCS6A01G129700.1	Wheat	extracellular, plasma membrane, vacuole	37.24	35.67
TraesCS6D01G118900.1	Wheat	extracellular	37.1	35.63
TraesCS7B01G334700.1	Wheat	mitochondrion	37.39	35.61
TraesCS7D01G425500.1	Wheat	plasma membrane	37.1	35.48
TraesCS6B01G157000.1	Wheat	plasma membrane, plastid	38.42	35.45
OQU83397	Sorghum	plasma membrane	37.98	35.43
Os02t0155700-00	Rice	plasma membrane	31.38	35.37
TraesCS6A01G129600.1	Wheat	extracellular	36.8	35.35
HORVU7Hr1G094290.1	Barley	plasma membrane	12.9	35.34
TraesCS6B01G156800.2	Wheat	endoplasmic reticulum, plasma membrane	28.89	35.3
HORVU6Hr1G018240.1	Barley	endoplasmic reticulum, extracellular, vacuole	21.85	35.22
Os02t0156200-00	Rice	plasma membrane	37.54	35.16
HORVU4Hr1G080720.1	Barley	vacuole	24.19	35.11
TraesCS4B01G040700.1	Wheat	extracellular, plasma membrane, vacuole	36.66	35.01
EER88870	Sorghum	plasma membrane	36.95	34.85
CDX81649	Canola	extracellular	30.21	34.74
TraesCS4D01G038100.1	Wheat	extracellular	36.36	34.73
Zm00001d042623_P001	Maize	plastid	16.57	34.56
HORVU6Hr1G023210.3	Barley	extracellular, plasma membrane	38.42	34.25
HORVU6Hr1G031910.6	Barley	endoplasmic reticulum, vacuole	39.0	34.19
TraesCS7D01G425600.1	Wheat	plasma membrane	36.66	33.97
Zm00001d005908_P001	Maize	plastid	21.26	33.64
TraesCS6B01G154400.1	Wheat	plastid	13.49	33.58
Os02t0155900-00	Rice	cytosol	11.58	33.33
Os02t0515125-00	Rice	plasma membrane	31.96	33.33
Solyc03g123780.2.1	Tomato	plasma membrane	45.01	33.12
CDY53544	Canola	cytosol	11.88	32.93
KXG23540	Sorghum	cytosol	32.4	32.89
KRH47735	Soybean	plasma membrane	47.65	32.76
HORVU0Hr1G031790.1	Barley	cytosol	15.98	32.63
KRH06301	Soybean	plasma membrane	50.59	32.39
HORVU4Hr1G006450.1	Barley	cytosol	33.14	32.33
Os02t0156800-01	Rice	extracellular, vacuole	7.04	32.21
Os02t0157400-01	Rice	extracellular, vacuole	7.04	32.21
TraesCS6D01G116800.1	Wheat	vacuole	17.3	31.89
TraesCS6A01G128200.1	Wheat	vacuole	14.52	31.83
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	49.85	31.54
HORVU6Hr1G024800.2	Barley	cytosol, plasma membrane	36.51	31.28
TraesCS6D01G119000.1	Wheat	plasma membrane	13.78	30.92
PGSC0003DMT400023733	Potato	plasma membrane	49.12	30.79
HORVU6Hr1G022420.10	Barley	cytosol	13.34	30.74
TraesCS7A01G408300.1	Wheat	vacuole	13.78	30.72
TraesCS6B01G158000.1	Wheat	extracellular, plasma membrane, vacuole	16.28	30.58
OQU84820	Sorghum	extracellular, plastid, vacuole	15.1	30.38
KRH68996	Soybean	plasma membrane	43.84	30.2
HORVU6Hr1G024860.15	Barley	extracellular, plasma membrane, vacuole	37.1	29.69
TraesCS6B01G155800.1	Wheat	mitochondrion	13.49	29.58
TraesCS6B01G158400.1	Wheat	extracellular	12.76	29.19
Os02t0157100-00	Rice	extracellular	11.0	29.18
HORVU2Hr1G055170.1	Barley	cytosol, mitochondrion, vacuole	16.13	29.1
HORVU0Hr1G015280.1	Barley	plasma membrane	38.56	29.03
HORVU2Hr1G046130.1	Barley	cytosol	6.89	28.48
TraesCS6B01G155400.1	Wheat	extracellular	9.38	28.32
TraesCS6A01G125200.1	Wheat	plasma membrane	38.12	28.17
KRH06825	Soybean	cytosol, extracellular, nucleus	5.57	27.94
HORVU5Hr1G070330.1	Barley	cytosol, extracellular	6.45	27.5
CDY04711	Canola	cytosol	11.44	27.08
HORVU7Hr1G050010.1	Barley	cytosol	6.3	26.88
TraesCS6B01G152900.1	Wheat	plasma membrane	40.91	26.6
Os02t0153900-01	Rice	plasma membrane	40.76	26.45
TraesCS6B01G153700.1	Wheat	plasma membrane	40.62	26.41
TraesCS6D01G116000.1	Wheat	plasma membrane	33.72	26.38
TraesCS6D01G115300.1	Wheat	plasma membrane	40.47	26.31
TraesCS6A01G124300.1	Wheat	plasma membrane	40.47	26.29
Os02t0153500-00	Rice	plasma membrane	40.32	26.22
TraesCS6B01G153400.1	Wheat	plasma membrane	40.76	26.2
OQU84392	Sorghum	plasma membrane	39.59	26.14
TraesCS6D01G116100.1	Wheat	plasma membrane	40.18	26.1
TraesCS6D01G115700.1	Wheat	plasma membrane	40.47	26.06
Os02t0153400-00	Rice	plasma membrane	40.62	26.06
TraesCS6B01G153300.1	Wheat	plasma membrane	40.32	26.04
KXG29501	Sorghum	plasma membrane	40.32	25.99
Os06t0691800-01	Rice	plasma membrane	40.62	25.98
TraesCS6A01G124800.1	Wheat	plasma membrane	40.03	25.95
TraesCS6D01G114800.1	Wheat	plasma membrane	40.32	25.89
HORVU6Hr1G023290.1	Barley	plasma membrane	40.62	25.89
TraesCS6B01G152300.1	Wheat	plasma membrane	39.59	25.89
TraesCS6B01G153500.1	Wheat	plasma membrane	39.0	25.85
Os02t0154200-01	Rice	plasma membrane	39.74	25.83
TraesCS6A01G125300.1	Wheat	plasma membrane	40.03	25.83
TraesCS6D01G115200.2	Wheat	plasma membrane	39.74	25.79
Zm00001d053865_P007	Maize	cytosol	37.39	25.78
TraesCS6D01G114600.1	Wheat	plasma membrane	39.59	25.69
TraesCS6D01G115100.1	Wheat	plasma membrane	39.59	25.69
TraesCS6B01G152800.1	Wheat	plasma membrane	39.74	25.66
TraesCS6D01G115900.1	Wheat	plasma membrane	38.71	25.66
Zm00001d053867_P001	Maize	plasma membrane	40.91	25.64
HORVU6Hr1G023770.2	Barley	plasma membrane	40.03	25.63
Os02t0153700-01	Rice	plasma membrane	39.3	25.6
Os02t0153100-00	Rice	plasma membrane	39.44	25.59
TraesCS6B01G152600.1	Wheat	plasma membrane	40.03	25.59
Os02t0153200-01	Rice	plasma membrane	39.3	25.52
TraesCS6A01G124700.1	Wheat	plasma membrane	39.3	25.5
TraesCS6A01G125400.3	Wheat	plasma membrane	38.27	25.46
TraesCS6A01G124500.1	Wheat	plasma membrane	39.59	25.38
HORVU6Hr1G023730.2	Barley	plasma membrane	38.12	25.29
EES06297	Sorghum	plasma membrane	39.15	25.28
HORVU6Hr1G023100.9	Barley	plasma membrane	39.3	25.26
TraesCS6B01G153100.1	Wheat	plasma membrane	39.0	25.24
TraesCS6B01G152700.1	Wheat	plasma membrane	38.86	25.21
HORVU6Hr1G023090.1	Barley	plasma membrane, plastid	39.59	25.16
HORVU6Hr1G023340.1	Barley	plasma membrane	38.71	25.0
TraesCS6A01G125500.1	Wheat	plasma membrane	38.71	24.98
TraesCS6A01G125000.1	Wheat	plasma membrane	38.56	24.86
Os02t0154000-00	Rice	plasma membrane	38.12	24.86
TraesCS7A01G435300.1	Wheat	plasma membrane, plastid	38.71	24.84
TraesCS6A01G125600.1	Wheat	plasma membrane	37.24	24.71
TraesCS6D01G115400.1	Wheat	plasma membrane	38.27	24.67
TraesCS6D01G115000.1	Wheat	plasma membrane	35.78	24.57
TraesCS7D01G426000.1	Wheat	plasma membrane	38.27	24.55
TraesCS7B01G335000.2	Wheat	plasma membrane, plastid	37.98	24.39
CDY03063	Canola	plasma membrane	35.78	24.3
HORVU7Hr1G099520.1	Barley	plasma membrane	38.56	24.26
CDX96252	Canola	plasma membrane	33.28	24.12
CDY28812	Canola	plasma membrane	33.14	24.09
TraesCS7A01G435000.1	Wheat	plasma membrane	38.12	24.05
TraesCS7D01G425700.1	Wheat	plasma membrane	37.98	23.94
HORVU3Hr1G061440.1	Barley	extracellular	5.87	23.81
TraesCS7B01G334900.1	Wheat	plasma membrane	37.68	23.73
EER88868	Sorghum	mitochondrion, plastid	30.65	23.64
HORVU7Hr1G099550.1	Barley	plasma membrane, plastid	38.27	23.56
CDY20214	Canola	plasma membrane	34.75	23.51
CDY15822	Canola	plasma membrane	30.5	23.45
CDY14342	Canola	plasma membrane	34.31	23.4
TraesCS6A01G124600.1	Wheat	cytosol	25.37	23.38
Zm00001d053866_P001	Maize	plastid	20.82	23.09
Os06t0692300-00	Rice	plasma membrane	36.36	23.05
Os06t0692100-01	Rice	plasma membrane	35.19	22.92
CDY09384	Canola	plasma membrane	29.62	22.88
EER88869	Sorghum	plasma membrane	36.8	22.67
Os06t0692500-00	Rice	plasma membrane	35.04	22.48
HORVU4Hr1G006540.1	Barley	extracellular	10.7	21.66
TraesCS6A01G129000.1	Wheat	plasma membrane	37.68	21.33
Zm00001d015298_P001	Maize	cytosol, plasma membrane, plastid	19.94	21.02
Zm00001d014557_P001	Maize	plasma membrane, plastid	21.41	20.65
Os06t0692600-01	Rice	extracellular	30.79	19.7
HORVU4Hr1G023740.3	Barley	plastid	21.99	19.48
Zm00001d014555_P001	Maize	plasma membrane	24.19	19.21
Zm00001d036534_P001	Maize	cytosol	18.18	18.65
TraesCS6A01G124900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	14.22	16.19
HORVU6Hr1G059580.1	Barley	plasma membrane	13.05	15.7
HORVU6Hr1G023370.1	Barley	cytosol	6.16	9.35
Os02t0155600-00	Rice	cytosol, peroxisome, plastid	6.45	6.58
CDY72222	Canola	cytosol, nucleus, plastid	0.15	0.98

Protein Annotations

MapMan:11.10.1.2.2	Gene3D:3.80.10.10	GO:A0A078D996	EnsemblPlants:CDX83918	ProteinID:CDX83918	ProteinID:CDX83918.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00139696001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF9	SMART:SM00369	SUPFAM:SSF52058
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE30C3	SEG:seg	:	:

Description

BnaC08g17270D

Coordinates

chrLK031834:+:1244017..1246203

Molecular Weight (calculated)

75310.8 Da

IEP (calculated)

7.850

GRAVY (calculated)

0.003

Length

682 amino acids

Sequence
(BLAST)

001: MIFKAKGLVR ASSTTTQPLS SHMLRLLLLC VAFLFLTVSE AGCNHQDQES LLWFSGNVSS SVSPLNWNPS VDCCSWEGIT CDDSSNSHIT AIYLPFRGLK
101: GKLPFSVLKL HHLSQLNLSH NHLSGPLPLD FLSSLDQLTV LDLSYNSFTG PIPSFMCLSS PQLSTLDFSY NDFSGHIPRG LGRCLRLSVL RAGFNHLSGE
201: IPRDIYNLSK LEKLVLPANH LSGKIDDDIT QLKKLTSLEL YSNNLEGDIP KGIGKLSSLQ VLQLHTNNIT GTVPLSLANC TNLVKLNLRK NQLEGTLSEL
301: DFSRFQRLSI LDLGKNSFSG EFPWRVHSCK SLTAMRFASN KLTGQVSPQV LELESLSFLS LSDNQLTNIT GALSILQGCR NLSTLLIGKN FYNETFPSDR
401: DLISPDGFPN LRIFASGGCG LRGEIPAWLI KLKSLAVMDL SHNQLVGSIP GWLGTLPHLF YIDLSDNLLS RELPKELFQL KALISLKGYD ATERNNLKLP
501: VYINPNNLTA HYQYNKLSSF PPAIYIRRNN LKGSIPVETG QLKALHALEL SHNCLSGSIP NELSNLTNLE RLDLSNNNLS GRIPWSLTRL HFMSYFNVAN
601: NTLQGPIPTG SQFDTFPRAH FEGNSLLFGG VLLNSCPAPT QSPVTTTDEE KLTRIFTVAV ATGFSLTFTL VILVLNCYVD MI

Best Arabidopsis Sequence Match ( AT1G17250.1 )
(BLAST)

001: MTNEGRFKAK GFVRTSSTTR PIQALSFHMI GILLQCVLFI SVLSIAVSEA LCNSQDRESL LWFSGNVSSS VSPLNWNPSI DCCSWEGITC DDSPDSHITA
101: ISLPFRALYG KLPLSVLRLH HLSQLNLSHN RLSGHLPSGF LSALDQLKVL DLSYNSLDGE LPVEQTFRNG SNRCFPIRIV DLSSNFLQGE ILPSSIFMQG
201: TFDLISFNVS KNSFTGSIPS FMCKSSPQLS KLDFSYNDFT GNIPQGLGRC LKLSVLQAGF NNISGEIPSD IYNLSELEQL FLPVNHLSGK INDDITHLTK
301: LKSLELYSNH LGGEIPMDIG QLSRLQSLQL HINNITGTVP PSLANCTNLV KLNLRLNRLE GTLSELDFSR FQSLSILDLG NNSFSGDFPW RVHSCKSLSA
401: MRFASNKLTG QISPHVLELE SLSILSLSDN KLMNITGALG ILQGCRNLST LLIGKNFYNE TFPSDKDLIS SDGFPNLQIF ASGGSGLRGE IPAWLIKLKS
501: LAVIDLSHNQ LVGSIPGWLG TFPHLFYIDL SENLLSGELP KDLFQLKALM SQKAYDATER NYLKLPVFVS PNNVTTHQQY NQLFSLPPGI YIRRNNLKGS
601: IPIEVGQLKV LHVLELSHNY LSGIIPHELS KLTSLERLDL SNNHLSGRIP WSLTSLHYMS YFNVVNNSLD GPIPTGSQFD TFPQANFKGN PLLCGGILLT
701: SCKASTKLPA TTTNKADTED EEELKFIFIL GVATGFFVSY CFYWCFFARL DAFISK

Arabidopsis Description

AtRLP3RLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.