CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84402	Sorghum	endoplasmic reticulum, vacuole	37.05	48.73
OQU84395	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	50.6	47.29
KXG29504	Sorghum	plasma membrane	41.67	46.59
EES06299	Sorghum	plasma membrane	48.66	45.93
EES06300	Sorghum	plasma membrane	48.07	45.11
OQU84393	Sorghum	plasma membrane	47.62	44.69
EES06303	Sorghum	plasma membrane	48.81	44.63
OQU84820	Sorghum	extracellular, plastid, vacuole	22.32	44.25
EES08691	Sorghum	plasma membrane	46.73	43.01
EER88870	Sorghum	plasma membrane	46.13	42.88
OQU83397	Sorghum	plasma membrane	46.13	42.41
KXG29501	Sorghum	plasma membrane	53.27	33.84
EES06297	Sorghum	plasma membrane	51.34	32.67
CDX83918	Canola	mitochondrion, plasma membrane	32.89	32.4
CDX96780	Canola	mitochondrion, plasma membrane	32.74	32.26
AT1G17240.2	Thale cress	plasma membrane	35.12	32.15
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	32.59	32.11
OQU84392	Sorghum	plasma membrane	47.77	31.07
AT1G17250.1	Thale cress	plasma membrane	34.82	30.95
OQU82553	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	29.76	29.24
CDX81812	Canola	extracellular, plasma membrane	22.32	27.88
KXG23107	Sorghum	extracellular, plasma membrane, vacuole	24.7	26.77
EER88869	Sorghum	plasma membrane	43.45	26.38
EER88868	Sorghum	mitochondrion, plastid	34.52	26.24
CDY48482	Canola	plasma membrane	26.79	26.2
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	10.86	25.35
Solyc03g123780.2.1	Tomato	plasma membrane	34.52	25.03
KRH06825	Soybean	cytosol, extracellular, nucleus	5.06	25.0
KRH68996	Soybean	plasma membrane	35.71	24.24
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	38.54	24.03
KRH06301	Soybean	plasma membrane	37.95	23.94
Bra008027.1-P	Field mustard	plasma membrane	37.2	23.21
PGSC0003DMT400023733	Potato	plasma membrane	37.5	23.16
CDX82157	Canola	plasma membrane	36.9	23.03
Bra016068.1-P	Field mustard	plasma membrane	37.2	23.0
KRH47735	Soybean	plasma membrane	33.93	22.98
CDX96394	Canola	plasma membrane	37.2	22.98
EER95739	Sorghum	plasma membrane	34.97	22.84
AT1G72300.1	Thale cress	plasma membrane	37.2	22.83
EES11633	Sorghum	plasma membrane	34.67	22.53
KXG30676	Sorghum	plasma membrane	34.08	21.83
EES04361	Sorghum	plasma membrane	35.57	21.67
CDY03644	Canola	plasma membrane	26.49	20.63
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1B6PCW3	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KXG23540	ProteinID:KXG23540	ProteinID:KXG23540.1	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF08263	PFAM:PF13516
PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR43932	PANTHER:PTHR43932:SF12	SMART:SM00369	EnsemblPlantsGene:SORBI_3008G107300
SUPFAM:SSF52047	SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI00081AB60E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:50524236..50526414

Molecular Weight (calculated)

73181.4 Da

IEP (calculated)

4.895

GRAVY (calculated)

0.043

Length

672 amino acids

Sequence
(BLAST)

001: MMMMKNHQTS KQSKDETTHT SSPTIESILI PRRNQMMIME NHQAIVLGFG TLGVVLLLSL VSPATSCTPL EEASLLQFLN ELSPAGPSHT LLSETWRNST
101: ASCCAWEGVT CDGNGTVTEL LLPSRGLEGN ISASLGNLTG LRRLDLSRNS LSGGLPPELM SSASVLVLDV SFNRLSGELQ EYSPSSLEYH PLQVLNVSSN
201: FFFGDFPSTA WGKKPDLVEI NASHNSFHDG VPYSFCFGSP SSFAVLDLSY NLFTGGIPSG IGECSALRVL KVGHNDIGGE IPDELFNATS LEQLSFPQSG
301: LTGELRGELV AKLGALQILD LQGNNLVGEI PDSIGELHRL KELHLGRNTM RGELSKVNFS GLPSLEILDL TSNSFTGEIP ESVYSCSKLT TLQLSSNRFH
401: GQISRSLANL ISLSFLSLAN NAFKNITNVL YALGNSKNIT TLLLQFNFRG SCLLSGNIPL WLSKLTRLEI LDLANNRLTG PIPVWIDSLS FLYHLDLSNN
501: RLTEDIPTAN VAVLSAPISV LFPDQETDGV FPAVLNLSNN HLTGTIPSEI GQLKSLVVLN LSFNSLSGSN PQELCNLTNL QVVDLSHNHL TCSIPSALNN
601: LHMLSTFDVS YNDLEGEIPT LFHTTSSLLS WQNELLERSS LQFLLVRSSL SECYMIRQSC PDIWQCKPCS SF

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.