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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G401700.1 Wheat golgi, vacuole 55.6 63.41
HORVU3Hr1G061440.1 Barley extracellular 14.52 62.5
TraesCS7D01G425600.1 Wheat plasma membrane 63.07 61.96
TraesCS7D01G425500.1 Wheat plasma membrane 60.72 61.57
HORVU7Hr1G094290.1 Barley plasma membrane 21.02 61.04
TraesCS7B01G334700.1 Wheat mitochondrion 59.89 60.47
TraesCS7A01G408300.1 Wheat vacuole 25.17 59.48
HORVU2Hr1G055170.1 Barley cytosol, mitochondrion, vacuole 30.71 58.73
OQU84393 Sorghum plasma membrane 53.25 53.77
OQU84395 Sorghum cytosol, mitochondrion, plasma membrane, plastid 53.11 53.41
EES06299 Sorghum plasma membrane 52.56 53.37
KXG29504 Sorghum plasma membrane 43.57 52.41
EES06300 Sorghum plasma membrane 51.31 51.82
OQU84402 Sorghum endoplasmic reticulum, vacuole 36.1 51.08
EES06303 Sorghum plasma membrane 51.59 50.75
OQU83397 Sorghum plasma membrane 49.93 49.38
EES08691 Sorghum plasma membrane 49.38 48.9
OQU84820 Sorghum extracellular, plastid, vacuole 22.82 48.67
EER88868 Sorghum mitochondrion, plastid 57.12 46.72
KXG23540 Sorghum cytosol 42.88 46.13
TraesCS7A01G435300.1 Wheat plasma membrane, plastid 64.73 44.03
TraesCS7D01G426000.1 Wheat plasma membrane 64.73 44.03
HORVU6Hr1G022420.10 Barley cytosol 17.98 43.92
TraesCS7B01G335000.2 Wheat plasma membrane, plastid 64.45 43.88
Os06t0691800-01 Rice plasma membrane 64.32 43.62
HORVU7Hr1G099550.1 Barley plasma membrane, plastid 64.18 41.88
KXG29501 Sorghum plasma membrane 56.57 38.66
EES06297 Sorghum plasma membrane 56.29 38.54
OQU84392 Sorghum plasma membrane 53.39 37.37
CDX83918 Canola mitochondrion, plasma membrane 34.85 36.95
AT1G17240.2 Thale cress plasma membrane 37.34 36.78
CDX96780 Canola mitochondrion, plasma membrane 34.58 36.66
Bra016611.1-P Field mustard mitochondrion, plasma membrane 34.58 36.66
CDX81812 Canola extracellular, plasma membrane 25.86 34.76
Bra025987.1-P Field mustard cytosol, golgi, plasma membrane 13.69 34.38
AT1G17250.1 Thale cress plasma membrane 35.68 34.13
OQU82553 Sorghum cytosol, endoplasmic reticulum, plasma membrane 30.43 32.16
KXG23107 Sorghum extracellular, plasma membrane, vacuole 27.52 32.1
KRH06825 Soybean cytosol, extracellular, nucleus 5.81 30.88
CDY48482 Canola plasma membrane 28.35 29.84
Solyc03g123780.2.1 Tomato plasma membrane 36.93 28.8
VIT_09s0002g00080.t01 Wine grape plasma membrane, plastid 42.19 28.29
KRH06301 Soybean plasma membrane 41.08 27.89
EER88869 Sorghum plasma membrane 42.19 27.55
KRH47735 Soybean plasma membrane 37.34 27.22
KRH68996 Soybean plasma membrane 37.21 27.17
PGSC0003DMT400023733 Potato plasma membrane 40.39 26.84
CDX82157 Canola plasma membrane 37.76 25.35
Bra008027.1-P Field mustard plasma membrane 37.76 25.35
Bra016068.1-P Field mustard plasma membrane 38.04 25.3
CDX96394 Canola plasma membrane 38.04 25.28
AT1G72300.1 Thale cress plasma membrane 37.62 24.84
EER95739 Sorghum plasma membrane 35.13 24.68
KXG30676 Sorghum plasma membrane 35.41 24.4
EES11633 Sorghum plasma membrane 34.02 23.79
EES04361 Sorghum plasma membrane 36.24 23.75
CDY03644 Canola plasma membrane 26.83 22.48
CDY72222 Canola cytosol, nucleus, plastid 0.28 1.96
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1UniProt:C5Z8Q3EnsemblPlants:EER88870ProteinID:EER88870ProteinID:EER88870.2
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF08263PFAM:PF13855PRINTS:PR00019PFscan:PS51450PANTHER:PTHR43932PANTHER:PTHR43932:SF5
SMART:SM00369EnsemblPlantsGene:SORBI_3010G242000SUPFAM:SSF52058SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0007F262D2
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:-:58336385..58338809
Molecular Weight (calculated)
78935.2 Da
IEP (calculated)
7.228
GRAVY (calculated)
0.070
Length
723 amino acids
Sequence
(BLAST)
001: MQSVNLPRSN SSTSKLPVPF FGLAFVLLSC ASLASSCTEQ EKSSLIDFRD GLSQEGKGSL SVSWANSTDC CRWEGITCSF DGMVTGVSLS SKGLQGRIPP
101: SLSNLTGLLH LNLSHNSLYG NLPAEMVFSS RIIILDVSFN HLSGPLQESQ SSNTSLPLKV LNISSNFFTG QLPSTTLQVM NNLVALNASN NSFTGQIPSI
201: CNHSPSLAML DLSLNKFTGT ISPEFGNCST LKVLKAGHNK LATPSFPNNN LQGTLDGSSL VKLGNLVFLN LGSNELSGKM PDSIGQLVRL EELHLDNNLM
301: FGELPSTLGN CTSLRYITIR NNSFMGDLSE VNFTQLDLRT VDFSLNKFNG TIPESIYACS NLIALRLSYN NFHGQLSPRI GDLKSLSFLS LTNNSLTDIA
401: NVIRCLKRCK NLTTLFIGTN FHGETMPQDE EIDSFDNLQI LTIDACPLVG KIPLWLSKLR KLEILDLSYN HLTGTIPSWI NRLELLFFLD VSSNRLTGDI
501: PPELMEMPML QSEKNAAKLD PKFLELPVFW TQSRQYRLIN AFPNVLNLCN NSLTGIIPQG IGQLKVLNVL NFSTNSLSGE IPQQICNLTN LQTLDLSNNQ
601: LTGELPSALS NLHFLSWFNV SNNDLEGPVP SGGQFNTFTN SSYIGNSNLC GPTLSIHCGP VEAPPASMKR SHKKTILAVA FGVIFGGLAA LSLLACFLIA
701: RIVIRLYIFL LKEINSAFKK ARV
Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.