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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d001877_P001 Maize plasma membrane 91.3 91.74
Os04t0672100-01 Rice plasma membrane 76.31 77.96
TraesCS2A01G550200.1 Wheat plasma membrane 77.27 76.53
TraesCS2D01G551200.1 Wheat plasma membrane 77.08 76.34
TraesCS2B01G580800.1 Wheat plasma membrane 76.69 75.96
OQU82553 Sorghum cytosol, endoplasmic reticulum, plasma membrane 47.2 71.34
HORVU2Hr1G120830.2 Barley plasma membrane 67.99 67.47
TraesCS2A01G550600.1 Wheat extracellular, vacuole 34.91 65.76
Os04t0672600-01 Rice extracellular, plasma membrane 45.65 65.56
TraesCS2D01G551600.1 Wheat extracellular, plasma membrane, vacuole 45.16 62.68
VIT_01s0010g01710.t01 Wine grape cytosol 28.43 62.29
TraesCS2D01G551700.1 Wheat plastid 34.82 62.18
TraesCS2B01G581300.1 Wheat plasma membrane 44.68 61.93
TraesCS2B01G581100.1 Wheat extracellular, plasma membrane, vacuole 44.39 61.61
TraesCS2D01G551800.1 Wheat extracellular, plasma membrane 44.58 60.58
TraesCS2A01G550700.1 Wheat extracellular 43.52 60.48
TraesCS2B01G581400.1 Wheat extracellular, plasma membrane 44.39 60.32
GSMUA_Achr3P27100_001 Banana plasma membrane 43.13 56.82
CDY15822 Canola plasma membrane 45.65 53.21
KXG30676 Sorghum plasma membrane 53.97 53.19
CDY09384 Canola plasma membrane 45.16 52.89
GSMUA_AchrUn_... Banana plasma membrane 39.85 52.15
Bra026610.1-P Field mustard plasma membrane 47.29 51.86
GSMUA_Achr7P04140_001 Banana plasma membrane 33.17 51.73
CDY03063 Canola plasma membrane 49.52 51.0
PGSC0003DMT400042178 Potato plasma membrane 49.81 50.84
AT2G02220.1 Thale cress plasma membrane 49.52 50.79
Solyc01g008140.2.1 Tomato plasma membrane 46.91 50.16
EER95739 Sorghum plasma membrane 48.45 48.69
EES04361 Sorghum plasma membrane 51.64 48.41
Bra026823.1-P Field mustard plasma membrane 27.66 41.87
CDY04712 Canola cytosol 6.09 41.72
KXG29501 Sorghum plasma membrane 42.17 41.21
CDX81649 Canola extracellular 23.6 41.15
OQU84392 Sorghum plasma membrane 41.1 41.14
EES06297 Sorghum plasma membrane 41.59 40.72
EER88868 Sorghum mitochondrion, plastid 34.72 40.61
KRG94670 Soybean extracellular 23.31 39.57
KRG94671 Soybean extracellular 24.95 39.21
EER88869 Sorghum plasma membrane 40.91 38.21
KXG23107 Sorghum extracellular, plasma membrane, vacuole 22.24 37.1
EES06299 Sorghum plasma membrane 25.53 37.08
OQU84393 Sorghum plasma membrane 25.24 36.45
EES06303 Sorghum plasma membrane 25.63 36.05
KXG29504 Sorghum plasma membrane 20.79 35.77
CDY53544 Canola cytosol 8.51 35.77
EES08691 Sorghum plasma membrane 24.76 35.07
OQU83397 Sorghum plasma membrane 24.76 35.02
OQU84395 Sorghum cytosol, mitochondrion, plasma membrane, plastid 24.18 34.77
KXG23540 Sorghum cytosol 22.53 34.67
EES06300 Sorghum plasma membrane 23.98 34.64
GSMUA_Achr7P04150_001 Banana endoplasmic reticulum, extracellular, plasma membrane 36.36 34.53
OQU84402 Sorghum endoplasmic reticulum, vacuole 16.92 34.25
EER88870 Sorghum plasma membrane 23.79 34.02
OQU84820 Sorghum extracellular, plastid, vacuole 11.03 33.63
CDY04711 Canola cytosol 8.61 30.9
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.2.2MapMan:18.4.1.10.2Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:C5YA53
EnsemblPlants:EES11633ProteinID:EES11633ProteinID:EES11633.2GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF00560PFAM:PF08263PFAM:PF13855ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR43932PANTHER:PTHR43932:SF3InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SMART:SM00369EnsemblPlantsGene:SORBI_3006G262400SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112
unigene:Sbi.18998InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00081AE756SEG:seg
Description
hypothetical protein
Coordinates
chr6:-:59724408..59727512
Molecular Weight (calculated)
111913.0 Da
IEP (calculated)
6.099
GRAVY (calculated)
0.031
Length
1034 amino acids
Sequence
(BLAST)
0001: MGGFRWLFHF LLVSALLHVV RSGSSLESQA CDSADLKALL AFSDGLDSKP AGLVGWGHGD GAACCSWTGV ACDLGRVVAL DLSNKSLHGG ISSALASLDA
0101: LAALNLSRNA LRGAAPEEMA RLRSLRVLDL SANALSGPFP AATAAAAGGF PAIVEVNISF NSFDGPHPAF PAAANLTALD ISGNNFSGGI NSSALCLAPL
0201: EVLRFSGNAF SGEIPSGLSR CRALTELSLD GNYFTGNIPG DLYTLPNLKR LSLQENQLTG NLGTDLGNLS QIVQLDLSYN KFTGSIPDVF GKMRWLESVN
0301: LATNRLDGEL PASLSSCPLL RVISLRNNSL SGEIAIDFNL LPKLNTFDIG TNNLSGVIPP GIAVCTELRT LNLARNKLVG EIPESFKELR SLSYLSLTGN
0401: GFTNLASALQ VLQHLPNLTG LVLTRNFRGG ETMPVDGISG FKSMQVLVLA NCLLKGVIPP WLQSLGSLNV LDISWNNLNG NIPPWLGKLD NLFYIDLSNN
0501: SFSGELPMSF TQMRSLISTK GSSERSPTED LPLFIKRNST GKGLQYNQVS SFPPSLILSN NLLVGPILSS FGYLVKLHVL DLSWNNFSGP IPDDLSNMSS
0601: LEVLNLAHNN LSGTIPSSLT KLNFLSKFDV SYNNLTGDIP TGGQFSTFAP EDFDGNPTLC LRNSSCAEKD SSLGAAHSKK SKAALVGLGL GTAVGVLLFL
0701: FCAYVIVSRI VHSRMQERNP KAVANAEDSE SNSCLVLLFQ NNKEFSIEDI LKSTNNFDQA YIVGCGGFGL VYKSTLPDGR RVAIKRLSGD YSQIEREFQA
0801: EVETLSRAQH ENLVLLQGYC KVGNDRLLIY SYMENGSLDY WLHERADSGM LLDWQKRLRI AQGSARGLAY LHMSCDPHIL HRDIKSSNIL LDENFEAHLA
0901: DFGLARLICA YETHVTTDVV GTLGYIPPEY GQSPVATYKG DIYSFGIVLL ELLTGRRPVD MCRPKGTRDV VSWVLQMKEE GRETEVFHPS IHHKDNESQL
1001: MRILDIACLC VTAAPKSRPT SQQLVAWLDN IAEC
Best Arabidopsis Sequence Match ( AT2G02220.1 )
(BLAST)
0001: MRVHRFCVIV IFLTELLCFF YSSESQTTSR CHPHDLEALR DFIAHLEPKP DGWINSSSST DCCNWTGITC NSNNTGRVIR LELGNKKLSG KLSESLGKLD
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV
Arabidopsis Description
PSKR1Phytosulfokine receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.