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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:extracellular
PProwler:secretory
TargetP:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G551700.1 Wheat plastid 53.33 66.32
TraesCS2A01G550700.1 Wheat extracellular 66.81 64.65
TraesCS2D01G551600.1 Wheat extracellular, plasma membrane, vacuole 66.81 64.56
TraesCS2A01G550600.1 Wheat extracellular, vacuole 48.89 64.12
TraesCS2B01G581100.1 Wheat extracellular, plasma membrane, vacuole 65.42 63.22
OQU82553 Sorghum cytosol, endoplasmic reticulum, plasma membrane 59.86 63.01
TraesCS2D01G551800.1 Wheat extracellular, plasma membrane 66.25 62.68
TraesCS2B01G581300.1 Wheat plasma membrane 64.86 62.6
TraesCS2B01G581400.1 Wheat extracellular, plasma membrane 65.83 62.29
Os04t0672100-01 Rice plasma membrane 83.06 59.09
TraesCS2D01G551200.1 Wheat plasma membrane 67.92 46.84
TraesCS2B01G580800.1 Wheat plasma membrane 67.92 46.84
TraesCS2A01G550200.1 Wheat plasma membrane 67.5 46.55
Zm00001d001877_P001 Maize plasma membrane 65.56 45.87
EES11633 Sorghum plasma membrane 65.56 45.65
Bra026823.1-P Field mustard plasma membrane 37.78 39.82
CDY04712 Canola cytosol 8.19 39.07
HORVU2Hr1G120830.2 Barley plasma membrane 56.39 38.96
CDX81649 Canola extracellular 31.11 37.77
KRG94670 Soybean extracellular 30.56 36.12
KRG94671 Soybean extracellular 32.92 36.02
GSMUA_Achr7P04140_001 Banana plasma membrane 32.36 35.14
Os02t0156600-00 Rice plasma membrane 33.89 34.37
Os02t0155400-01 Rice plasma membrane 34.17 33.84
Os02t0157200-00 Rice plasma membrane 33.19 33.29
Os02t0156400-01 Rice cytosol, mitochondrion, plasma membrane, vacuole 33.06 33.15
Os02t0156200-00 Rice plasma membrane 33.47 33.1
Os02t0629400-01 Rice plasma membrane 46.81 32.03
Os02t0155700-00 Rice plasma membrane 26.81 31.9
CDY53544 Canola cytosol 10.83 31.71
CDY04711 Canola cytosol 12.64 31.6
Os02t0515125-00 Rice plasma membrane 28.61 31.5
Os02t0156633-00 Rice mitochondrion 30.0 31.44
Os02t0155900-00 Rice cytosol 10.28 31.22
GSMUA_Achr3P27100_001 Banana plasma membrane 33.75 30.96
Os02t0116700-01 Rice plasma membrane 45.56 30.94
Os02t0157501-00 Rice cytosol 7.64 30.22
AT2G02220.1 Thale cress plasma membrane 41.11 29.37
CDY03063 Canola plasma membrane 40.56 29.08
GSMUA_Achr7P04150_001 Banana endoplasmic reticulum, extracellular, plasma membrane 43.75 28.93
PGSC0003DMT400042178 Potato plasma membrane 40.42 28.73
Os07t0107800-01 Rice plasma membrane 41.25 28.7
CDY15822 Canola plasma membrane 35.28 28.64
Bra026610.1-P Field mustard plasma membrane 36.94 28.21
CDY09384 Canola plasma membrane 34.44 28.09
Solyc01g008140.2.1 Tomato plasma membrane 37.36 27.82
Os02t0157100-00 Rice extracellular 9.72 27.24
GSMUA_AchrUn_... Banana plasma membrane 29.72 27.09
Os02t0153200-01 Rice plasma membrane 35.83 24.57
Os02t0153100-00 Rice plasma membrane 35.83 24.55
Os02t0154000-00 Rice plasma membrane 35.42 24.38
Os02t0153400-00 Rice plasma membrane 35.56 24.08
Os02t0153700-01 Rice plasma membrane 35.0 24.07
Os02t0153500-00 Rice plasma membrane 34.72 23.83
Os02t0154200-01 Rice plasma membrane 34.58 23.74
Os02t0153900-01 Rice plasma membrane 34.44 23.6
Os06t0692100-01 Rice plasma membrane 34.31 23.59
Os02t0157400-01 Rice extracellular, vacuole 4.86 23.49
Os02t0156800-01 Rice extracellular, vacuole 4.86 23.49
Os06t0692300-00 Rice plasma membrane 34.72 23.23
Os06t0692500-00 Rice plasma membrane 34.03 23.05
Os06t0691800-01 Rice plasma membrane 34.03 22.98
Os06t0692600-01 Rice extracellular 30.69 20.73
VIT_01s0010g01710.t01 Wine grape cytosol 12.36 18.86
Os02t0155600-00 Rice cytosol, peroxisome, plastid 4.86 5.23
Protein Annotations
MapMan:11.10.1.2.2Gene3D:3.80.10.10ProteinID:BAF16140.1ProteinID:BAS91578.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:IPR001611InterPro:IPR032675
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypEnsemblPlantsGene:Os04g0672600EnsemblPlants:Os04t0672600-01
PFAM:PF08263PFAM:PF13855PANTHER:PTHR43932PANTHER:PTHR43932:SF3UniProt:Q0J947SMART:SM00369
SUPFAM:SSF52047SUPFAM:SSF52058SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000DD9336SEG:seg
Description
Leucine-rich repeat, N-terminal domain containing protein. (Os04t0672600-01)
Coordinates
chr4:-:34329739..34332205
Molecular Weight (calculated)
77954.4 Da
IEP (calculated)
7.208
GRAVY (calculated)
0.067
Length
720 amino acids
Sequence
(BLAST)
001: GSCCRCIRFL HVFVFVLHIH GGHSQMCDPA DLASLLAFSD GLDRMGAGLV GWGPNDTSCC SWTGISCDLG RVVELDLSNR SLSRNSFRGV AVAQLGRLPC
101: LRRLDLSTNG LVGAFPASGF PAIEVVNVSS NGFTGPHPAF PGAPNLTVLD ITGNAFSGGI NVTALCASPV KVLRFSANAF SGDVPAGFGQ CKLLNDLFLD
201: GNGLTGSLPK DLYTIPELRW LSLQENQLSG SLDKALGNLS KLTLIDLSYN MFNGNIPDVF GKLRSLESLN LASNQLNGTL PLSLSSCPML RVVSLRNNSL
301: SGEITIDCRL LTRLNNFDAG TNTLRGAIPP RLASCTELRT LNLARNKLQG ELPESFKNLT SLSYLSLTGN GFTNLSSALQ VLQHLPNLTS LVLTNNFRGG
401: ETMPMDGIEG FKRMQVLVLA NCALLGTVPP WLQSLKSLSV LDISWNNLHG EIPPWLGNLD SLFYIDLSNN SFSGELPATF TQMKSLISSN GSSGQASTGD
501: LPLSFVKKNS TSTGKGLQYN QLSSFPSSLI LSNNKLVGSI LPSFGRLVKL HVLDLGFNNF SGPIPDELSN MSSLEVLDLA HNDLSGSIPS SLTKLNFLSK
601: FDVSYNNLSG DVPAGGQFST FTEEEFAGNP ALCRSQSQSC YKRAVTTEMS SETRFTFGLF LTVEAGFAFG LLTVWNVLFF ASSWRAAYFQ MVDNFFDRFY
701: VITMVNLNRL RRKWEHKDHP
Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.