Factsheet for VIT_01s0010g01710.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04712	Canola	cytosol	12.5	39.07
CDY15822	Canola	plasma membrane	69.28	36.87
GSMUA_Achr5P19250_001	Banana	plasma membrane	56.14	36.05
Bra026610.1-P	Field mustard	plasma membrane	71.4	35.74
PGSC0003DMT400042178	Potato	plasma membrane	76.27	35.54
CDY09384	Canola	plasma membrane	64.62	34.54
Solyc01g008140.2.1	Tomato	plasma membrane	70.34	34.33
GSMUA_Achr3P27100_001	Banana	plasma membrane	56.57	34.01
AT2G02220.1	Thale cress	plasma membrane	71.4	33.43
CDY03063	Canola	plasma membrane	70.13	32.97
GSMUA_AchrUn_...	Banana	plasma membrane	51.06	30.51
GSMUA_Achr4P25970_001	Banana	mitochondrion, plasma membrane	42.37	29.11
EES11633	Sorghum	plasma membrane	62.29	28.43
Os04t0672100-01	Rice	plasma membrane	60.38	28.16
Os02t0629400-01	Rice	plasma membrane	62.71	28.14
KXG30676	Sorghum	plasma membrane	62.5	28.12
HORVU2Hr1G120830.2	Barley	plasma membrane	61.44	27.83
TraesCS2B01G580800.1	Wheat	plasma membrane	61.44	27.78
Zm00001d017291_P001	Maize	plastid	62.5	27.7
TraesCS6A01G222000.1	Wheat	plasma membrane	61.44	27.7
TraesCS2A01G550200.1	Wheat	plasma membrane	61.23	27.68
Zm00001d001877_P001	Maize	plasma membrane	60.17	27.6
TraesCS2D01G551200.1	Wheat	plasma membrane	61.02	27.59
TraesCS6B01G259100.1	Wheat	plasma membrane	61.44	27.57
TraesCS6D01G213000.1	Wheat	plasma membrane	61.23	27.47
GSMUA_Achr1P02020_001	Banana	plasma membrane	40.47	27.32
HORVU6Hr1G058960.1	Barley	plasma membrane	60.81	27.28
VIT_19s0014g02360.t01	Wine grape	plasma membrane	60.81	26.4
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	55.3	24.21
Os02t0116700-01	Rice	plasma membrane	53.39	23.77
Zm00001d014996_P001	Maize	plasma membrane	52.33	22.79
GSMUA_Achr7P04140_001	Banana	plasma membrane	31.99	22.78
TraesCS6A01G044700.1	Wheat	plasma membrane	51.91	22.71
EES04361	Sorghum	plasma membrane	52.75	22.57
TraesCS6D01G052100.1	Wheat	plasma membrane	51.27	22.45
TraesCS6B01G061000.1	Wheat	plasma membrane	51.06	22.44
HORVU6Hr1G009270.1	Barley	plasma membrane	51.69	22.36
CDY53544	Canola	cytosol	11.65	22.36
CDX81649	Canola	extracellular	22.03	17.54
Bra026823.1-P	Field mustard	plasma membrane	22.25	15.37
TraesCS2D01G551700.1	Wheat	plastid	17.8	14.51
GSMUA_Achr7P04150_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	31.36	13.59
KRG94670	Soybean	extracellular	17.16	13.3
KRG94671	Soybean	extracellular	18.22	13.07
Os04t0672600-01	Rice	extracellular, plasma membrane	18.86	12.36
TraesCS2A01G550700.1	Wheat	extracellular	19.28	12.23
TraesCS2D01G551600.1	Wheat	extracellular, plasma membrane, vacuole	18.43	11.68
TraesCS2B01G581100.1	Wheat	extracellular, plasma membrane, vacuole	18.43	11.68
TraesCS2B01G581400.1	Wheat	extracellular, plasma membrane	18.22	11.3
TraesCS2B01G581300.1	Wheat	plasma membrane	17.8	11.26
OQU82553	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	16.31	11.26
TraesCS2D01G551800.1	Wheat	extracellular, plasma membrane	18.01	11.17
CDY04711	Canola	cytosol	2.54	4.17
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	3.39	2.91

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	ProteinID:CCB51203	ProteinID:CCB51203.1
UniProt:F6HG10	EMBL:FN595754	GO:GO:0000166	GO:GO:0001653	GO:GO:0003674	GO:GO:0003824
GO:GO:0004383	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0031347	GO:GO:0038023	GO:GO:0045087
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
PFAM:PF00069	PFAM:PF13855	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR43932	PANTHER:PTHR43932:SF6
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0002109615	ArrayExpress:VIT_01s0010g01710	EnsemblPlantsGene:VIT_01s0010g01710	EnsemblPlants:VIT_01s0010g01710.t01	:	:

Description

No Description!

Coordinates

chr1:+:18076681..18078636

Molecular Weight (calculated)

52487.8 Da

IEP (calculated)

5.329

GRAVY (calculated)

-0.257

Length

472 amino acids

Sequence
(BLAST)

001: MEEPSSDFPL FIKRNVSGRG LQYNQVGSLP PTLDLSNNHL TGTIWPEFGN LKKLNVFELK CNNFSGTIPS SLSGMTSVET MDLSHNNLSG TIPDSLVELS
101: FLSKFSVAYN QLTGKIPSGG QFQTFSNSSF EGNAGLCGDH ASPCPSDDAD DQVPLGSPHG SKRSKGVIIG MSVGIGFGTT FLLALMCLIV LRTTRRGEVD
201: PEKEEADAND KELEQLGSRK VAIKRLSGDC GQMEREFQAE VEALSRAQHP NLVLLQGYCK YKNDRLLIYS YMENSSLDYW LHEKLDGPSS LDWDTRLQIA
301: QGAAMGLAYL HQSCEPHILH RDIKSSNILL DEKFEAHLAD FGLARLILPY DTHVTTDLVG TLGYIPPEYG QASVATYKGD VYSFGVVLLE LLTGKRPMDM
401: CKPRGCRDLI SWVIQMKKEK RESEVFDPFI YDKQHDKELL RVLDIACLCL SECPKIRPST EQLVSWLNNI LM

Best Arabidopsis Sequence Match ( AT2G02220.1 )
(BLAST)

0001: MRVHRFCVIV IFLTELLCFF YSSESQTTSR CHPHDLEALR DFIAHLEPKP DGWINSSSST DCCNWTGITC NSNNTGRVIR LELGNKKLSG KLSESLGKLD
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV

Arabidopsis Description

PSKR1Phytosulfokine receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.