Factsheet for GSMUA_Achr7P04150_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P04140_001	Banana	plasma membrane	41.32	67.87
GSMUA_AchrUn_...	Banana	plasma membrane	38.2	52.66
GSMUA_Achr3P27100_001	Banana	plasma membrane	34.34	47.64
Os04t0672600-01	Rice	extracellular, plasma membrane	28.93	43.75
TraesCS2D01G551700.1	Wheat	plastid	22.68	42.66
GSMUA_Achr1P02020_001	Banana	plasma membrane	26.72	41.63
TraesCS2D01G551600.1	Wheat	extracellular, plasma membrane, vacuole	28.28	41.34
OQU82553	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	25.8	41.08
CDY04712	Canola	cytosol	5.69	41.06
TraesCS2A01G550700.1	Wheat	extracellular	28.01	40.99
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	20.66	40.98
TraesCS2B01G581100.1	Wheat	extracellular, plasma membrane, vacuole	28.01	40.94
GSMUA_Achr4P25970_001	Banana	mitochondrion, plasma membrane	25.34	40.17
TraesCS2B01G581300.1	Wheat	plasma membrane	27.36	39.95
CDX81649	Canola	extracellular	21.4	39.29
KRG94671	Soybean	extracellular	23.51	38.91
Bra026823.1-P	Field mustard	plasma membrane	24.33	38.8
TraesCS2B01G581400.1	Wheat	extracellular, plasma membrane	26.81	38.37
GSMUA_Achr5P19250_001	Banana	plasma membrane	25.9	38.37
TraesCS2D01G551800.1	Wheat	extracellular, plasma membrane	26.72	38.24
Os04t0672100-01	Rice	plasma membrane	34.99	37.65
KRG94670	Soybean	extracellular	20.75	37.11
TraesCS2B01G580800.1	Wheat	plasma membrane	35.54	37.07
TraesCS2A01G550200.1	Wheat	plasma membrane	35.26	36.78
TraesCS2D01G551200.1	Wheat	plasma membrane	35.17	36.69
TraesCS6D01G052100.1	Wheat	plasma membrane	36.27	36.64
TraesCS6A01G044700.1	Wheat	plasma membrane	36.27	36.61
EES11633	Sorghum	plasma membrane	34.53	36.36
TraesCS6B01G061000.1	Wheat	plasma membrane	35.72	36.22
GSMUA_Achr2P13880_001	Banana	plasma membrane	25.07	36.16
Zm00001d001877_P001	Maize	plasma membrane	34.16	36.15
Zm00001d014996_P001	Maize	plasma membrane	35.9	36.07
Solyc01g008140.2.1	Tomato	plasma membrane	31.96	35.99
Os02t0116700-01	Rice	plasma membrane	34.89	35.85
HORVU6Hr1G009270.1	Barley	plasma membrane	35.81	35.75
EES04361	Sorghum	plasma membrane	35.9	35.45
PGSC0003DMT400042178	Potato	plasma membrane	32.97	35.44
GSMUA_Achr5P17820_001	Banana	cytosol, nucleus, plasma membrane	8.36	35.14
AT2G02220.1	Thale cress	plasma membrane	31.41	33.93
CDY15822	Canola	plasma membrane	27.18	33.37
CDY03063	Canola	plasma membrane	30.76	33.37
GSMUA_Achr5P17810_001	Banana	extracellular	15.06	33.33
CDY09384	Canola	plasma membrane	26.81	33.07
CDY04711	Canola	cytosol	8.63	32.64
CDY53544	Canola	cytosol	7.35	32.52
Bra026610.1-P	Field mustard	plasma membrane	28.1	32.45
HORVU2Hr1G120830.2	Barley	plasma membrane	30.85	32.25
GSMUA_Achr5P17800_001	Banana	extracellular, vacuole	14.23	32.09
VIT_01s0010g01710.t01	Wine grape	cytosol	13.59	31.36
GSMUA_Achr4P25760_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	20.29	31.26

Protein Annotations

Gene3D:1.25.40.10	Gene3D:3.30.1370.110	Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr7G04150_001	EnsemblPlants:GSMUA_Achr7P04150_001
EnsemblPlants:GSMUA_Achr7T04150_001	InterPro:IPR001611	InterPro:IPR002625	InterPro:IPR002885	InterPro:IPR011990	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0TEK5	PFAM:PF00560
PFAM:PF01535	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS50828	PFscan:PS51375
PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF6	InterPro:Pentatricopeptide_repeat	SMART:SM00365	SMART:SM00369
SMART:SM00463	SUPFAM:SSF160443	SUPFAM:SSF52047	SUPFAM:SSF52058	InterPro:Smr_dom	InterPro:Smr_dom_sf
TIGRFAMs:TIGR00756	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000295B30B	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G04150_001]

Coordinates

chr7:+:3216597..3220273

Molecular Weight (calculated)

118793.0 Da

IEP (calculated)

7.239

GRAVY (calculated)

0.031

Length

1089 amino acids

Sequence
(BLAST)

0001: MVPREGFLAL LSVRACCFLF FLIRARQAFS QNQTCDSKDL NALLGFANEL DLAKLGWVLN GSSSGSCCDW PGVTCGPPTV NGRRLKRLDL SVNYLQGVVP
0101: PQLLRLHLLE FIDLSTNQLE GVIPSNLSLP AIQVFNISYN QFTGGHPILG GSSNLTSFDL TSNDFYGPID AGICNSSAKI RILRFSENRF YGDLPRGLKS
0201: CSSLTELWLS MNDLGGDLPD ALFDMTSMTQ LFLQGNQFSG DLSTNMSNLS NLVEIDLSLN RFSGFIPDVF GSLAKLESFS AQSNKLEGNL PSSLSDLSSL
0301: RVLNLNNNSL SGEINLNCTA MPKLSTLNLG SNSFSGPIPD MLPHCVQLTT LNLGNNNLTG EIPHSFKNFT SLSDLSLTGN HFSNISSALQ ILQKMELLVI
0401: ANCALTGSIP SWLANLTRLK VLDISWNRLS GSIPKWVGNL DDLFYLDLSN NSLSGQLPNS LTQMKSLVRK GLQYNQVSSF PPSLILGDNM LVGQILPGFR
0501: NLVVLHVLDL SWNNLSGNIP AELSGMTSLE ILDLSHNNLT GAIPSSLTNL SFLSKFDVAY NNLVGQVPAG GQFSTFSRSD FEGNPGLCGF LSSPCESKDP
0601: LPPASRENNI VTLKENKTKS AIVSLLIGIG VGIVTIILLA VAYRVFLKSR SGMLDGRARM ALLWATAASF SPSSAGLRCA LAGRRKHADR LVSDLRGASA
0701: DDPSAADRLI RKFLAASSKP AALHALSSFL SLSSPFAPPL YERISEASWF SWKPKLAATV VALLEKQGRC AEAETLTLDA VSRSKTHRDL ALFYCDLIEC
0801: FSEQGLEQPV LETYARLREV PFAGRRPYES MIKALCLMGM PGEAEAKLKE MASSGCKPSP FEFRSVIQSY GRSGLLSEMR RVVGSMEDAG LPIDTVCVNV
0901: VLSCYGHHGE LPEMASWMTK MREKGIVFSI RTFNCVLNSC PRVVSIASDA GSLPLSMEEL LQKLENESSS RTEALLVQEL TSSSVLADIS EWSPSGSKLD
1001: LHGLHVAAAY IILLKWIQEL RRRFQEEDVI PLEISVICGS GKHSERRGRS PIKDLVSEMM FRKSSPMRID SKNPGRFVAR GKAVWEWMC

Best Arabidopsis Sequence Match ( AT2G17033.2 )
(BLAST)

001: MAALIQTIHG GVVVTRTLTL VYPSTFTSRH KALNQMTSSS NSGLRRFLFT PPQRLSQGIC YWGAELSNNV SWTYKTKMVV RSKAGAVPLM KHGDRFLSSL
101: SSPALAGDPS AINRHIKKFV AASPKSVALN VLSHLLSDQT SHPHLSFFAL SLYSEITEAS WFDWNPKLIA ELIALLNKQE RFDESETLLS TAVSRLKSNE
201: RDFTLFLCNL VESNSKQGSI QGFSEASFRL REIIQRSSSV YVKTQAYKSM VSGLCNMDQP HDAERVIEEM RMEKIKPGLF EYKSVLYGYG RLGLFDDMNR
301: VVHRMGTEGH KIDTVCSNMV LSSYGAHDAL PQMGSWLQKL KGFNVPFSIR TYNSVLNSCP TIISMLKDLD SCPVSLSELR TFLNEDEALL VHELTQSSVL
401: DEAIEWNAVE GKLDLHGMHL SSSYLILLQW MDETRLRFSE EKCVIPAEIV VVSGSGKHSN VRGESPVKAL VKKIMVRTGS PMRIDRKNVG SFIAKGKTVK
501: EWLCK

Arabidopsis Description

Pentatricopeptide repeat-containing protein At2g17033 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWA9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.