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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09384 Canola plasma membrane 91.66 92.07
CDY03063 Canola plasma membrane 85.12 75.2
AT2G02220.1 Thale cress plasma membrane 82.64 72.72
VIT_01s0010g01710.t01 Wine grape cytosol 36.87 69.28
CDY04712 Canola cytosol 9.92 58.28
Solyc01g008140.2.1 Tomato plasma membrane 60.32 55.33
PGSC0003DMT400042178 Potato plasma membrane 63.02 55.18
GSMUA_Achr5P19250_001 Banana plasma membrane 43.86 52.93
GSMUA_Achr3P27100_001 Banana plasma membrane 45.77 51.72
GSMUA_Achr4P25970_001 Banana mitochondrion, plasma membrane 37.99 49.05
GSMUA_Achr1P02020_001 Banana plasma membrane 38.22 48.5
CDX81649 Canola extracellular 31.79 47.55
CDX96252 Canola plasma membrane 49.72 46.87
CDY28812 Canola plasma membrane 49.04 46.38
Zm00001d001877_P001 Maize plasma membrane 52.99 45.68
EES11633 Sorghum plasma membrane 53.21 45.65
GSMUA_AchrUn_... Banana plasma membrane 40.59 45.57
Os02t0629400-01 Rice plasma membrane 53.66 45.25
KXG30676 Sorghum plasma membrane 53.44 45.19
Os04t0672100-01 Rice plasma membrane 51.52 45.16
CDY53544 Canola cytosol 12.51 45.12
TraesCS2A01G550200.1 Wheat plasma membrane 52.87 44.92
TraesCS2B01G580800.1 Wheat plasma membrane 52.76 44.83
TraesCS2D01G551200.1 Wheat plasma membrane 52.65 44.73
TraesCS6A01G222000.1 Wheat plasma membrane 52.76 44.7
GSMUA_Achr7P04140_001 Banana plasma membrane 33.26 44.49
HORVU6Hr1G058960.1 Barley plasma membrane 52.65 44.39
CDY14342 Canola plasma membrane 49.94 44.3
TraesCS6D01G213000.1 Wheat plasma membrane 52.54 44.3
Zm00001d017291_P001 Maize plastid 52.99 44.13
TraesCS6B01G259100.1 Wheat plasma membrane 52.31 44.11
CDY20214 Canola plasma membrane 49.72 43.75
Os02t0116700-01 Rice plasma membrane 49.61 41.51
CDY03644 Canola plasma membrane 40.25 41.37
HORVU2Hr1G120830.2 Barley plasma membrane 47.69 40.59
EES04361 Sorghum plasma membrane 50.28 40.44
TraesCS6B01G061000.1 Wheat plasma membrane 48.59 40.13
TraesCS6D01G052100.1 Wheat plasma membrane 48.7 40.07
TraesCS6A01G044700.1 Wheat plasma membrane 48.48 39.85
Zm00001d014996_P001 Maize plasma membrane 48.59 39.76
HORVU6Hr1G009270.1 Barley plasma membrane 48.03 39.05
CDX82157 Canola plasma membrane 45.66 37.6
CDY72222 Canola cytosol, nucleus, plastid 4.28 37.25
CDX96394 Canola plasma membrane 45.32 36.95
KRG94671 Soybean extracellular 26.94 36.32
TraesCS2D01G551700.1 Wheat plastid 23.68 36.27
OQU82553 Sorghum cytosol, endoplasmic reticulum, plasma membrane 27.28 35.38
Os04t0672600-01 Rice extracellular, plasma membrane 28.64 35.28
TraesCS2D01G551600.1 Wheat extracellular, plasma membrane, vacuole 29.2 34.77
TraesCS2B01G581100.1 Wheat extracellular, plasma membrane, vacuole 29.09 34.63
TraesCS2A01G550700.1 Wheat extracellular 28.97 34.54
KRG94670 Soybean extracellular 23.68 34.48
TraesCS2B01G581400.1 Wheat extracellular, plasma membrane 29.2 34.03
TraesCS2D01G551800.1 Wheat extracellular, plasma membrane 29.2 34.03
CDX81812 Canola extracellular, plasma membrane 20.63 34.01
TraesCS2B01G581300.1 Wheat plasma membrane 28.41 33.78
TraesCS2A01G550600.1 Wheat extracellular, vacuole 20.74 33.52
CDY04711 Canola cytosol 10.15 31.25
CDX83918 Canola mitochondrion, plasma membrane 23.45 30.5
CDX96780 Canola mitochondrion, plasma membrane 23.11 30.06
GSMUA_Achr7P04150_001 Banana endoplasmic reticulum, extracellular, plasma membrane 33.37 27.18
CDY48482 Canola plasma membrane 20.07 25.91
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.2.2MapMan:18.4.1.10.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078FSJ4
UniProt:A0A078FSJ4EnsemblPlants:CDY15822ProteinID:CDY15822ProteinID:CDY15822.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00090153001InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00069PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS51450PANTHER:PTHR43932PANTHER:PTHR43932:SF6InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SMART:SM00369SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EDEA0CSEG:seg::::
Description
BnaC02g34410DBnaC02g34410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSJ4]
Coordinates
chrLK032058:-:547622..550438
Molecular Weight (calculated)
98438.0 Da
IEP (calculated)
7.427
GRAVY (calculated)
-0.140
Length
887 amino acids
Sequence
(BLAST)
001: MRVHRLWVIV IFLTELLLCF RPSESQTPLT CHPHWLANDN CCSWTGITCN SSFTGRVTKL ELGNKKLSGT LSESLGNLDQ IKVLNLSRNF IKNSIPLSIL
101: TSPTLQTLDL SFNDLSGEIP QALNLPSLQS LDLSTNNFNG SLTRSIGNLS SLVRLDVSWN SFSGEIPDVF RELTRLKYLS AQTNRLSGGI PRSLASSRTL
201: NLLNLRNNSL TGPLLLNCTA MVELNSLDLG TNRFNGRLPE NLSVCKRLKN VNLARNGFRG EVPESFKDFQ SLSYFSLSNS SLVNITSALR ILQNCKNLTA
301: LVLTLNFNGE ALPPDDASIV GFEKLKVLVV ANCRLTGSVP RWLSSSRDLQ LLDLSWNRLT GAIPSWIGDF NYLFYLDLSN NSFTGEIPKS LTQLQSLTSG
401: SISLDEPARG LQYNQIVGFP PTIELGNNNL SGPIWEEFGD LKKLHVFDLK WNELSGSIPS SLSGMTSLEL LDLSNNRLSG SIPGSLQNLT FLSKFSVAGN
501: NLSGRIPSGG QFQTFPNSSF EFNNLCGERR FPCSGEASSA GTTYIKHSRR RSRGGEIGMA VGIAFGSVFL LTLLALIVLR ARRRSGEVDP EIEEESMNRK
601: EIEETGSKIV VLFDQSNIIG CGGFGMVYKA VLPDGRKVAI KRLSGDCGQI EREFKAEVET LSRAQHPNLV LLQGFCFYNT DRLLIYSYME NGSLDYWLHE
701: RNDGPALLDW RTRVRIAQGA AKGLYYLHQA CEPHILHRDI KSSNILLDEN FDSHLADFGL ARLMNPYETH VSTDLVGTLG YIPPEYGQAS VATYKGDVYS
801: FGVVLLELLT DRRPVDMCKP KGGRDLISWV VRMKSEGRAS EVFDPFIHGK ENEKEMVRVL EIACLCLSGN PKQRPTTEQL VSWLDHV
Best Arabidopsis Sequence Match ( AT2G02220.1 )
(BLAST)
0001: MRVHRFCVIV IFLTELLCFF YSSESQTTSR CHPHDLEALR DFIAHLEPKP DGWINSSSST DCCNWTGITC NSNNTGRVIR LELGNKKLSG KLSESLGKLD
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV
Arabidopsis Description
PSKR1Phytosulfokine receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.