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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28812 Canola plasma membrane 94.47 94.78
CDY14342 Canola plasma membrane 83.74 78.8
CDY20214 Canola plasma membrane 84.17 78.57
AT5G53890.1 Thale cress plasma membrane 84.17 76.45
KRH27268 Soybean plasma membrane 48.03 66.67
Solyc07g063000.2.1 Tomato plasma membrane 62.17 57.52
PGSC0003DMT400032398 Potato plasma membrane 63.02 56.8
VIT_19s0014g02360.t01 Wine grape plasma membrane 65.57 56.76
KRH37880 Soybean plastid 7.65 55.81
KRH22055 Soybean plasma membrane 62.49 55.58
KRH55233 Soybean plasma membrane 60.79 54.42
KRG88816 Soybean plasma membrane 60.79 54.37
GSMUA_Achr2P13880_001 Banana plasma membrane 40.38 50.33
CDY09384 Canola plasma membrane 47.08 50.17
CDY15822 Canola plasma membrane 46.87 49.72
Os07t0107800-01 Rice plasma membrane 54.3 49.37
TraesCS2B01G281900.1 Wheat plasma membrane 53.13 49.12
TraesCS2D01G263500.1 Wheat plasma membrane 52.71 48.72
EER95739 Sorghum plasma membrane 53.13 48.59
TraesCS2A01G260000.1 Wheat plasma membrane 52.5 48.53
Zm00001d018635_P001 Maize plasma membrane 52.28 48.05
CDY03063 Canola plasma membrane 49.31 46.22
CDY04712 Canola cytosol 7.12 44.37
CDY03644 Canola plasma membrane 38.79 42.29
CDX82157 Canola plasma membrane 44.53 38.9
CDX96394 Canola plasma membrane 44.31 38.33
CDY53544 Canola cytosol 9.88 37.8
CDX81649 Canola extracellular 22.95 36.42
CDX81812 Canola extracellular, plasma membrane 20.3 35.5
CDY72222 Canola cytosol, nucleus, plastid 3.72 34.31
CDX83918 Canola mitochondrion, plasma membrane 24.12 33.28
CDX96780 Canola mitochondrion, plasma membrane 23.7 32.7
CDY04711 Canola cytosol 8.29 27.08
CDY48482 Canola plasma membrane 19.55 26.78
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.2.2MapMan:18.4.1.10.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078E560
EnsemblPlants:CDX96252ProteinID:CDX96252ProteinID:CDX96252.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00102381001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF08263PFAM:PF13855
PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR43932
PANTHER:PTHR43932:SF10InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00365SMART:SM00369
SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EE7811SEG:seg::::
Description
BnaC02g13990D
Coordinates
chrLK031893:+:1221225..1224589
Molecular Weight (calculated)
103790.0 Da
IEP (calculated)
6.473
GRAVY (calculated)
-0.052
Length
941 amino acids
Sequence
(BLAST)
001: MVIILLLLVF FLGSSLSQPT LTCHPSDLTA LREFAGALKN MSVTESWLND SSCCEWGGVV CDDVSSRVTK LVLSEKGLEG EVSSSLSELS ELQLLDLSHN
101: HLKGELPSEI SKLQQLQVLD LSHNMLTGNL SNLGVFPRLV MLNVSNNLLE GEIHPQKLSN LTALKSLLIS ENRFSGEIPD VFGNLTHLEH LDLSSNKFSG
201: HFPSSLSQCS KLKVLDLRNN SLTGSVDLNF TVFQDLCVLD LASNHFSGPL PDSLGRCSNM KILSLAKNGF TGEIPNTFKN LKSLLFLSLS NNSFVNLSEA
301: MRVLQHCGNL STLILSKNFI QEEVPRDVTG FDNLTILSLG NCGLRGHIPS WLLSCKKLQV LDLSWNHFYG AIPSWIGQME SLFYIDFSNN TLTGTIPVAL
401: TNLKSLIHLN CNDSQMIDSS GIPLYVKRNK SSHGLPYNQV SRFPPSIYLN NNRLNGTILR EIGRLKELHM LDLSRNSFTG EIPDSISGLD NLELLDLSYN
501: HLNGSIPLSF QSLTFLSRFS VAYNRLAGPI PSGGQFYSFP HSSFEGNLGL CRAIDSPCDV LMSNILKPKG GASSSRGNGK FGRSSIVVLT ISLAVGITLL
601: LAAILLRLSR KEADDNDRVT DVDEEAPKAP TSSKIVLFHS CGCKDLSVAD LLKSTNGFSQ ANIIGCGGFG LVYKANLPDG SKAAVKRLSG DCGQMEREFQ
701: AEVEALSRAE HKNLVSLQGY CKHGNDRLLI YSFMENGSLD YWLHERVDAN ASLKWDVRLK IAKGAARGLA YLHKDCEPNV IHRDVKSSNI LLDESFEAHL
801: ADFGLARLLR PYDTHVTTDL VGTLGYIPPE YSQSLIATCR GDVYSFGVVL LELVTGRRPV EVCKGKSCRD LVSRVFQMKA EKREAELIDA TMRDNVEEKE
901: VLEMLEIACR CIDRDPRRRP LIEEVVAWLE NVPVESVKQQ C
Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)
0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ
Arabidopsis Description
PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.