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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018635_P001 Maize plasma membrane 88.05 88.48
TraesCS2A01G260000.1 Wheat plasma membrane 75.51 76.33
TraesCS2B01G281900.1 Wheat plasma membrane 75.41 76.23
TraesCS2D01G263500.1 Wheat plasma membrane 75.32 76.13
Os07t0107800-01 Rice plasma membrane 74.93 74.49
KRH27268 Soybean plasma membrane 41.98 63.72
GSMUA_Achr2P13880_001 Banana plasma membrane 45.29 61.72
Solyc07g063000.2.1 Tomato plasma membrane 55.3 55.95
PGSC0003DMT400032398 Potato plasma membrane 55.78 54.98
KRH22055 Soybean plasma membrane 55.98 54.44
VIT_19s0014g02360.t01 Wine grape plasma membrane 56.75 53.73
CDY28812 Canola plasma membrane 48.49 53.2
CDX96252 Canola plasma membrane 48.59 53.13
KRG88816 Soybean plasma membrane 54.23 53.04
KRH55233 Soybean plasma membrane 54.13 53.0
Bra003026.1-P Field mustard plasma membrane 51.02 52.55
Bra022679.1-P Field mustard plasma membrane 47.91 52.5
CDY14342 Canola plasma membrane 51.02 52.5
AT5G53890.1 Thale cress plasma membrane 52.67 52.32
CDY20214 Canola plasma membrane 50.73 51.79
KRH37880 Soybean plastid 6.32 50.39
EES11633 Sorghum plasma membrane 48.69 48.45
KXG30676 Sorghum plasma membrane 48.79 47.86
EER88868 Sorghum mitochondrion, plastid 37.03 43.1
EES04361 Sorghum plasma membrane 45.29 42.25
KXG29501 Sorghum plasma membrane 41.59 40.45
OQU84392 Sorghum plasma membrane 40.43 40.27
EES06297 Sorghum plasma membrane 40.91 39.87
OQU82553 Sorghum cytosol, endoplasmic reticulum, plasma membrane 25.75 38.74
EER88869 Sorghum plasma membrane 40.62 37.76
KXG23107 Sorghum extracellular, plasma membrane, vacuole 22.16 36.77
EES06299 Sorghum plasma membrane 25.27 36.52
EES06303 Sorghum plasma membrane 25.36 35.51
EES08691 Sorghum plasma membrane 25.07 35.34
OQU83397 Sorghum plasma membrane 24.98 35.16
EER88870 Sorghum plasma membrane 24.68 35.13
KXG23540 Sorghum cytosol 22.84 34.97
EES06300 Sorghum plasma membrane 24.3 34.92
OQU84393 Sorghum plasma membrane 24.2 34.78
OQU84395 Sorghum cytosol, mitochondrion, plasma membrane, plastid 24.2 34.63
KXG29504 Sorghum plasma membrane 20.02 34.28
OQU84402 Sorghum endoplasmic reticulum, vacuole 16.42 33.07
OQU84820 Sorghum extracellular, plastid, vacuole 8.45 25.66
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.2.2MapMan:18.4.1.10.2Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8081598
UniProt:C5X772EnsemblPlants:EER95739ProteinID:EER95739ProteinID:EER95739.2GO:GO:0000166GO:GO:0001653
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004871GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF00560PFAM:PF08263PFAM:PF13855PRINTS:PR00019
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR43932PANTHER:PTHR43932:SF10
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00365SMART:SM00369EnsemblPlantsGene:SORBI_3002G006100
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0009DC8639
RefSeq:XP_002459218.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:+:600680..604194
Molecular Weight (calculated)
110683.0 Da
IEP (calculated)
7.197
GRAVY (calculated)
0.032
Length
1029 amino acids
Sequence
(BLAST)
0001: MAPKRVPLLF LLLLLVLPPA LVPQSRAAAD PDPAPCHPDD LRALLAFAGN LTSAGALHWP STTSSSPSCC AWDGVSCDTG GRVSALRLPS RGLAGALPYP
0101: SLTALPFLRD LDLSRNALTG AVAAVLAALP GTLRAANLSS NLLHGGLLLG PAPPLLLLPR HLDALDASNN SISGPLAPDL CAGAPKLRVL DLSANRLTGA
0201: LPSSTTPPPC AATLREVNLA SNAFTGDLPA ALFDLTALRK LSLAANRLTG HLTPRLADLK SLTFLDLSGN RFSGDLPDAF GGLTSLENLA AHSNAFTGSL
0301: PPSLSRLSSL RVLDLRNNSL SGPVAAVNFS GMPALASVDL ATNQLNGTLP VSLAGCRELK SLSLARNRLT GELPQDYSRL VSLSMLSLSN NSLHNISGAL
0401: GVLGACKNLT TLILTQNFVG EELPDNGVGG FGGLEVLALG DCALRGKVPK WLTRCKKLEV LDLSWNQLVG TIPSWIGEFE YLSYLDLSNN TLVGEIPKSL
0501: TQLKSLVAVT QSPGMAFTGM PLYVKHNRSI SGRQYNQLSN FPPSLILNNN RLNGTIWPEF GNLRELHVLD LSTNFISGSI PDSLSRMENL EVLDLSSNNL
0601: SGEIPSSLTE LTFLSKFSVA HNHLTGQIPN GGQFLTFSNS SFDGNPALCR SSSCNPILSS GTPSDMDVKP AASSIRNRRN KILGVAICIG LALAVFLAVI
0701: LVNMSKREVT AIDYEDTEGS SHELYDTYSK PVLFFQNSTV KELTVSDLVR STNNFDQANI IGCGGFGLVY KAYLPDGTKA AVKRLSGDCG QMEREFRAEV
0801: EALSQAQHKN LVTLKGYCRY GNDRLLIYSY MENGSLDYWL HERSDGGYML KWESRLRIAQ GSARGLAYLH KVCEPNIIHR DVKSSNILLN ENFEACLADF
0901: GLARLIQPYD THVTTDLVGT LGYIPPEYSQ AVIATPKGDV FSFGVVLLEL LTGRRPVDVS KFKGSRDLIS WVLQMKSEKK EEQIFDSLIW SKTHEKQLLS
1001: VLETACKCIS TDPRQRPSIE QVVSCLDNV
Best Arabidopsis Sequence Match ( AT5G53890.1 )
(BLAST)
0001: MVIILLLVFF VGSSVSQPCH PNDLSALREL AGALKNKSVT ESWLNGSRCC EWDGVFCEGS DVSGRVTKLV LPEKGLEGVI SKSLGELTEL RVLDLSRNQL
0101: KGEVPAEISK LEQLQVLDLS HNLLSGSVLG VVSGLKLIQS LNISSNSLSG KLSDVGVFPG LVMLNVSNNL FEGEIHPELC SSSGGIQVLD LSMNRLVGNL
0201: DGLYNCSKSI QQLHIDSNRL TGQLPDYLYS IRELEQLSLS GNYLSGELSK NLSNLSGLKS LLISENRFSD VIPDVFGNLT QLEHLDVSSN KFSGRFPPSL
0301: SQCSKLRVLD LRNNSLSGSI NLNFTGFTDL CVLDLASNHF SGPLPDSLGH CPKMKILSLA KNEFRGKIPD TFKNLQSLLF LSLSNNSFVD FSETMNVLQH
0401: CRNLSTLILS KNFIGEEIPN NVTGFDNLAI LALGNCGLRG QIPSWLLNCK KLEVLDLSWN HFYGTIPHWI GKMESLFYID FSNNTLTGAI PVAITELKNL
0501: IRLNGTASQM TDSSGIPLYV KRNKSSNGLP YNQVSRFPPS IYLNNNRLNG TILPEIGRLK ELHMLDLSRN NFTGTIPDSI SGLDNLEVLD LSYNHLYGSI
0601: PLSFQSLTFL SRFSVAYNRL TGAIPSGGQF YSFPHSSFEG NLGLCRAIDS PCDVLMSNML NPKGSSRRNN NGGKFGRSSI VVLTISLAIG ITLLLSVILL
0701: RISRKDVDDR INDVDEETIS GVSKALGPSK IVLFHSCGCK DLSVEELLKS TNNFSQANII GCGGFGLVYK ANFPDGSKAA VKRLSGDCGQ MEREFQAEVE
0801: ALSRAEHKNL VSLQGYCKHG NDRLLIYSFM ENGSLDYWLH ERVDGNMTLI WDVRLKIAQG AARGLAYLHK VCEPNVIHRD VKSSNILLDE KFEAHLADFG
0901: LARLLRPYDT HVTTDLVGTL GYIPPEYSQS LIATCRGDVY SFGVVLLELV TGRRPVEVCK GKSCRDLVSR VFQMKAEKRE AELIDTTIRE NVNERTVLEM
1001: LEIACKCIDH EPRRRPLIEE VVTWLEDLPM ESVQQQ
Arabidopsis Description
PSKR2Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGV8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.