CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 1
endoplasmic reticulum 3
extracellular 3
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83397	Sorghum	plasma membrane	74.3	72.78
EES08691	Sorghum	plasma membrane	74.16	72.74
OQU84395	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	58.24	58.0
Os02t0155900-00	Rice	cytosol	18.85	56.96
OQU84393	Sorghum	plasma membrane	56.84	56.84
EES06299	Sorghum	plasma membrane	56.28	56.6
Os02t0156200-00	Rice	plasma membrane	57.12	56.18
Os02t0155400-01	Rice	plasma membrane	56.98	56.12
KXG29504	Sorghum	plasma membrane	46.93	55.91
EES06303	Sorghum	plasma membrane	56.01	54.56
OQU84402	Sorghum	endoplasmic reticulum, vacuole	38.83	54.4
Os02t0515125-00	Rice	plasma membrane	49.58	54.28
EER88870	Sorghum	plasma membrane	51.82	51.31
OQU84820	Sorghum	extracellular, plastid, vacuole	23.88	50.44
KXG23540	Sorghum	cytosol	45.11	48.07
KXG29501	Sorghum	plasma membrane	60.47	40.93
EES06297	Sorghum	plasma membrane	59.22	40.15
OQU84392	Sorghum	plasma membrane	54.89	38.04
CDX83918	Canola	mitochondrion, plasma membrane	36.03	37.83
CDX96780	Canola	mitochondrion, plasma membrane	36.03	37.83
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	36.03	37.83
AT1G17240.2	Thale cress	plasma membrane	37.43	36.51
AT1G17250.1	Thale cress	plasma membrane	36.87	34.92
KXG23107	Sorghum	extracellular, plasma membrane, vacuole	28.91	33.39
OQU82553	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	31.56	33.04
CDX81812	Canola	extracellular, plasma membrane	24.72	32.9
EER88868	Sorghum	mitochondrion, plastid	40.5	32.81
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.99	32.29
CDY48482	Canola	plasma membrane	29.19	30.42
KRH06825	Soybean	cytosol, extracellular, nucleus	5.59	29.41
EER88869	Sorghum	plasma membrane	42.88	27.73
Solyc03g123780.2.1	Tomato	plasma membrane	34.92	26.97
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	39.8	26.44
KRH06301	Soybean	plasma membrane	38.55	25.92
PGSC0003DMT400023733	Potato	plasma membrane	38.55	25.37
KRH47735	Soybean	plasma membrane	35.06	25.3
KRH68996	Soybean	plasma membrane	34.78	25.15
CDX82157	Canola	plasma membrane	37.57	24.98
Bra008027.1-P	Field mustard	plasma membrane	37.57	24.98
Bra016068.1-P	Field mustard	plasma membrane	37.85	24.93
CDX96394	Canola	plasma membrane	37.85	24.91
KXG30676	Sorghum	plasma membrane	36.17	24.69
AT1G72300.1	Thale cress	plasma membrane	37.29	24.38
EER95739	Sorghum	plasma membrane	34.92	24.3
EES11633	Sorghum	plasma membrane	34.64	23.98
EES04361	Sorghum	plasma membrane	36.87	23.93
CDY03644	Canola	plasma membrane	27.37	22.71
Os02t0155600-00	Rice	cytosol, peroxisome, plastid	11.59	12.41
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8076073	UniProt:C5XVB1	EnsemblPlants:EES06300	ProteinID:EES06300
ProteinID:EES06300.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019
PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF12	SMART:SM00369	EnsemblPlantsGene:SORBI_3004G045100	SUPFAM:SSF52058
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A859FB	RefSeq:XP_002453324.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:3705318..3707468

Molecular Weight (calculated)

78688.1 Da

IEP (calculated)

6.275

GRAVY (calculated)

0.052

Length

716 amino acids

Sequence
(BLAST)

001: MQPLQYSCNN RKSEMLHIPL LGVALVLFLS LASPAISCKE EEKTSLFEFL NGLSQASGLT SSWQNDTNCC LWEGVICNVD GTVIDISLAA MGLEGHISPS
101: LGNLNGLLKL NLSGNLLSGE LPPKLLLSRS LTVLDVSFNK LSGEFHELQS TPDSAMKVMN ISSNFLTGYF PSTTLEGMKN LAALNMSNNS FAGEIPSTVC
201: VDKPFFVVLD LSYNQFIGRI PPELGNCSGL RVLKAGQNQL NGTLPAEIFN VTSLEHLSFP NNHLQGTLDP ERVGKLRNLA ILDLGWNGLN GKIPNSIGQL
301: KRLEELHLDN NNMSGELPPA LSSCSNLTTI ILKDNNFQGD LKRVNFSTLS NLKFLDCRSN KFTGTIPESL YSCSNLIALR LSFNNLHGQF SSGINNLKSL
401: RFLALAHNNF TNITNTLQIL SKSRSLALVL IGGNFKHETM PDYDEFHGFE NLMCLAINEC PLYGKLPNWL AKLKNLRGLL LDNNKLSGPI PAWINSLNLL
501: FYLDISNNNL TGDIPTALME MPTLEAAHSD PIILKFPIYL TPFLQYRTTS GFPKMLNLGN NKFTGVIPPE IGQLQALLTL NLSFNNLHGE IPQSVGNLTN
601: LQVLDLSYNN LTGAIPSALE RLHFLSKFNI SRNDLEGPVP TGGQFSTFPD SSFFGNPKLC SATLMRHCNS VDAAPVSVVS TEEYTDKVIF AMAFGMFFGV
701: GVLYDQMVLF RYIYFV

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.