CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53544	Canola	cytosol	37.44	90.24
Bra026823.1-P	Field mustard	plasma membrane	89.21	77.45
CDY04711	Canola	cytosol	31.53	64.93
CDY04712	Canola	cytosol	16.53	64.9
KRG94671	Soybean	extracellular	39.46	35.56
CDY03063	Canola	plasma membrane	57.0	33.67
KRG94670	Soybean	extracellular	34.06	33.17
TraesCS2D01G551700.1	Wheat	plastid	31.7	32.47
CDY09384	Canola	plasma membrane	47.55	31.94
CDY15822	Canola	plasma membrane	47.55	31.79
TraesCS2B01G581400.1	Wheat	extracellular, plasma membrane	40.13	31.27
TraesCS2D01G551800.1	Wheat	extracellular, plasma membrane	39.97	31.14
Os04t0672600-01	Rice	extracellular, plasma membrane	37.77	31.11
OQU82553	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	35.24	30.56
TraesCS2A01G550700.1	Wheat	extracellular	38.28	30.51
TraesCS2B01G581300.1	Wheat	plasma membrane	38.28	30.43
TraesCS2B01G581100.1	Wheat	extracellular, plasma membrane, vacuole	38.11	30.34
CDX83918	Canola	mitochondrion, plasma membrane	34.74	30.21
TraesCS2D01G551600.1	Wheat	extracellular, plasma membrane, vacuole	37.94	30.2
CDX81812	Canola	extracellular, plasma membrane	27.32	30.11
CDX96780	Canola	mitochondrion, plasma membrane	34.4	29.91
TraesCS2A01G550600.1	Wheat	extracellular, vacuole	27.66	29.87
GSMUA_Achr7P04140_001	Banana	plasma membrane	31.87	28.51
PGSC0003DMT400042178	Potato	plasma membrane	48.06	28.13
GSMUA_Achr1P02020_001	Banana	plasma membrane	32.38	27.47
Solyc01g008140.2.1	Tomato	plasma membrane	44.52	27.3
GSMUA_Achr3P27100_001	Banana	plasma membrane	34.91	26.37
GSMUA_Achr4P25970_001	Banana	mitochondrion, plasma membrane	29.17	25.18
Os02t0629400-01	Rice	plasma membrane	43.0	24.24
CDY48482	Canola	plasma membrane	27.99	24.16
KXG30676	Sorghum	plasma membrane	42.33	23.93
TraesCS6D01G213000.1	Wheat	plasma membrane	42.33	23.86
HORVU6Hr1G058960.1	Barley	plasma membrane	41.99	23.67
CDY03644	Canola	plasma membrane	34.4	23.64
EES11633	Sorghum	plasma membrane	41.15	23.6
TraesCS6A01G222000.1	Wheat	plasma membrane	41.65	23.59
TraesCS6B01G259100.1	Wheat	plasma membrane	41.65	23.48
TraesCS2B01G580800.1	Wheat	plasma membrane	41.32	23.47
TraesCS2A01G550200.1	Wheat	plasma membrane	41.15	23.37
Os04t0672100-01	Rice	plasma membrane	39.8	23.32
TraesCS2D01G551200.1	Wheat	plasma membrane	40.98	23.28
GSMUA_AchrUn_...	Banana	plasma membrane	30.69	23.04
Zm00001d001877_P001	Maize	plasma membrane	39.97	23.03
CDY28812	Canola	plasma membrane	36.42	23.03
CDX96252	Canola	plasma membrane	36.42	22.95
CDY20214	Canola	plasma membrane	38.95	22.92
Zm00001d017291_P001	Maize	plastid	40.98	22.82
CDY14342	Canola	plasma membrane	38.45	22.8
Os02t0116700-01	Rice	plasma membrane	39.63	22.17
VIT_01s0010g01710.t01	Wine grape	cytosol	17.54	22.03
EES04361	Sorghum	plasma membrane	40.64	21.85
GSMUA_Achr5P19250_001	Banana	plasma membrane	26.98	21.77
Zm00001d014996_P001	Maize	plasma membrane	39.46	21.59
CDX82157	Canola	plasma membrane	39.12	21.54
GSMUA_Achr7P04150_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	39.29	21.4
TraesCS6B01G061000.1	Wheat	plasma membrane	38.62	21.32
TraesCS6A01G044700.1	Wheat	plasma membrane	38.79	21.32
TraesCS6D01G052100.1	Wheat	plasma membrane	38.45	21.15
HORVU6Hr1G009270.1	Barley	plasma membrane	38.79	21.08
CDX96394	Canola	plasma membrane	38.28	20.86
HORVU2Hr1G120830.2	Barley	plasma membrane	35.24	20.06
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:A0A078D099	EnsemblPlants:CDX81649	ProteinID:CDX81649	ProteinID:CDX81649.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00136562001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF08263
PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF6
SMART:SM00369	SUPFAM:SSF52047	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEAE30	SEG:seg

Description

BnaC08g39520D

Coordinates

chrLK031826:-:163616..165664

Molecular Weight (calculated)

65324.7 Da

IEP (calculated)

6.377

GRAVY (calculated)

-0.094

Length

593 amino acids

Sequence
(BLAST)

001: MGHLIHHYWL VMIILDAAIF HSSNCTCHPR DLEALRDFIN ELSPKPDSWD FNSTGDCCEW EGITCDSVRV TKLKLVSKTI SGKLSESLGR LHHLRVLNLS
101: RNFISGSIPP SIFNLTNLEA LDLSSNGFTG EVTESLNLPS LKSLSLSSNE LNGSLPVHIC RNSAYLKLIR LESNRFSGEF PSGFEKCSLL QHLFLSGNEL
201: TGNIPENLFH LRRLSLLEIQ ENGLSGSLSP ALGNLSSLVH LDISSNSFSG EIPDVFKKLS KLEYVMAKSN RFIGGIPKSL ANSNFLRLLN LENNSLSSPL
301: YLNCAVMTNL TSLDLGSNKF NGSLPENLPL TGSMPRWLSK SSNLELLDLS WNGLTGAIPN WIGGFTNLFY LDLSNNSFTG EIPKSLTRLH SLISQEISAE
401: EPSLDLPIFL KRSKDGISLQ YNHFFRLPPT LELSLNNLSG PIWEEFGNLK SLHVFNLNDN RLSGHIPSSL SGMTSLEVLD LSNNHLSGSI PSSLQKLTFL
501: SKFSVANNSL SGRIPTGGQF QTFPNSSFEG NHVCGDHRFD CQAYTPDLQP PSTSDESDNS GGDFALDFSY GVALGFGLSF VVAIAFRHKL FRF

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.