Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53544 | Canola | cytosol | 36.42 | 22.36 |
| CDX81649 | Canola | extracellular | 64.9 | 16.53 |
| VIT_01s0010g01710.t01 | Wine grape | cytosol | 39.07 | 12.5 |
| CDX81812 | Canola | extracellular, plasma membrane | 37.75 | 10.59 |
| TraesCS2D01G551700.1 | Wheat | plastid | 39.74 | 10.36 |
| GSMUA_Achr7P04140_001 | Banana | plasma membrane | 43.71 | 9.95 |
| CDY15822 | Canola | plasma membrane | 58.28 | 9.92 |
| GSMUA_Achr1P02020_001 | Banana | plasma membrane | 45.7 | 9.87 |
| CDY09384 | Canola | plasma membrane | 57.62 | 9.85 |
| GSMUA_Achr4P25970_001 | Banana | mitochondrion, plasma membrane | 43.71 | 9.61 |
| KRG94671 | Soybean | extracellular | 41.72 | 9.57 |
| KRG94670 | Soybean | extracellular | 38.41 | 9.52 |
| CDY03063 | Canola | plasma membrane | 61.59 | 9.26 |
| GSMUA_Achr5P19250_001 | Banana | plasma membrane | 44.37 | 9.12 |
| OQU82553 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 40.4 | 8.92 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 39.74 | 8.8 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 39.74 | 8.8 |
| GSMUA_Achr3P27100_001 | Banana | plasma membrane | 45.03 | 8.66 |
| TraesCS2A01G550700.1 | Wheat | extracellular | 40.4 | 8.2 |
| Os04t0672600-01 | Rice | extracellular, plasma membrane | 39.07 | 8.19 |
| TraesCS2D01G551600.1 | Wheat | extracellular, plasma membrane, vacuole | 40.4 | 8.19 |
| TraesCS2B01G581100.1 | Wheat | extracellular, plasma membrane, vacuole | 40.4 | 8.19 |
| TraesCS2B01G581300.1 | Wheat | plasma membrane | 38.41 | 7.77 |
| Solyc01g008140.2.1 | Tomato | plasma membrane | 47.68 | 7.45 |
| CDY03644 | Canola | plasma membrane | 42.38 | 7.42 |
| TraesCS2D01G551800.1 | Wheat | extracellular, plasma membrane | 37.09 | 7.36 |
| TraesCS2B01G581400.1 | Wheat | extracellular, plasma membrane | 37.09 | 7.36 |
| CDY28812 | Canola | plasma membrane | 44.37 | 7.14 |
| CDX96252 | Canola | plasma membrane | 44.37 | 7.12 |
| PGSC0003DMT400042178 | Potato | plasma membrane | 47.68 | 7.11 |
| CDY48482 | Canola | plasma membrane | 31.13 | 6.84 |
| KXG30676 | Sorghum | plasma membrane | 46.36 | 6.67 |
| CDY20214 | Canola | plasma membrane | 44.37 | 6.65 |
| CDY14342 | Canola | plasma membrane | 43.71 | 6.6 |
| Os04t0672100-01 | Rice | plasma membrane | 43.71 | 6.52 |
| Os02t0629400-01 | Rice | plasma membrane | 45.03 | 6.46 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 33.77 | 6.46 |
| Zm00001d017291_P001 | Maize | plastid | 45.03 | 6.38 |
| TraesCS6A01G222000.1 | Wheat | plasma membrane | 43.05 | 6.21 |
| TraesCS6D01G213000.1 | Wheat | plasma membrane | 43.05 | 6.18 |
| TraesCS6B01G259100.1 | Wheat | plasma membrane | 43.05 | 6.18 |
| TraesCS2B01G580800.1 | Wheat | plasma membrane | 42.38 | 6.13 |
| TraesCS2D01G551200.1 | Wheat | plasma membrane | 42.38 | 6.13 |
| EES11633 | Sorghum | plasma membrane | 41.72 | 6.09 |
| HORVU6Hr1G058960.1 | Barley | plasma membrane | 42.38 | 6.08 |
| TraesCS6B01G061000.1 | Wheat | plasma membrane | 43.05 | 6.05 |
| HORVU2Hr1G120830.2 | Barley | plasma membrane | 41.72 | 6.05 |
| CDX82157 | Canola | plasma membrane | 43.05 | 6.04 |
| TraesCS2A01G550200.1 | Wheat | plasma membrane | 41.72 | 6.03 |
| TraesCS6D01G052100.1 | Wheat | plasma membrane | 43.05 | 6.03 |
| Zm00001d001877_P001 | Maize | plasma membrane | 41.06 | 6.03 |
| CDX96394 | Canola | plasma membrane | 43.05 | 5.97 |
| Os02t0116700-01 | Rice | plasma membrane | 41.72 | 5.94 |
| Zm00001d014996_P001 | Maize | plasma membrane | 42.38 | 5.9 |
| TraesCS6A01G044700.1 | Wheat | plasma membrane | 41.72 | 5.84 |
| EES04361 | Sorghum | plasma membrane | 42.38 | 5.8 |
| HORVU6Hr1G009270.1 | Barley | plasma membrane | 41.72 | 5.77 |
| GSMUA_Achr7P04150_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 41.06 | 5.69 |
| CDY04711 | Canola | cytosol | 10.6 | 5.56 |
| TraesCS2A01G550600.1 | Wheat | extracellular, vacuole | 8.61 | 2.37 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.66 | 0.98 |
Protein Annotations
| EnsemblPlants:CDY04712 | EnsemblPlantsGene:GSBRNA2T00119346001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR43932 | PANTHER:PTHR43932:SF6 |
| PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | ProteinID:CDY04712 | ProteinID:CDY04712.1 |
| SUPFAM:SSF52058 | UniParc:UPI0004EE9331 | MapMan:35.1 | : | : | : |
Description
BnaC05g18770D
Coordinates
chrLK031957:+:53337..57618
Molecular Weight (calculated)
16744.0 Da
IEP (calculated)
9.725
GRAVY (calculated)
-0.173
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRWLSKSTN LELLDLSWNS LTGAIPVKLH VANLNGNRLS GTIPSSLSEM TTLEVLDLSN NRFSGSIPES LQKLTFLSMF SVANNSLSGR IPSGGHFQTF
101: PDSSYEGNDF FFVTTGLNVK QVHQTKDDQV PVRLTTVIPR VARRKDLVYL N
101: PDSSYEGNDF FFVTTGLNVK QVHQTKDDQV PVRLTTVIPR VARRKDLVYL N
0001: MRVHRFCVIV IFLTELLCFF YSSESQTTSR CHPHDLEALR DFIAHLEPKP DGWINSSSST DCCNWTGITC NSNNTGRVIR LELGNKKLSG KLSESLGKLD
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV
0101: EIRVLNLSRN FIKDSIPLSI FNLKNLQTLD LSSNDLSGGI PTSINLPALQ SFDLSSNKFN GSLPSHICHN STQIRVVKLA VNYFAGNFTS GFGKCVLLEH
0201: LCLGMNDLTG NIPEDLFHLK RLNLLGIQEN RLSGSLSREI RNLSSLVRLD VSWNLFSGEI PDVFDELPQL KFFLGQTNGF IGGIPKSLAN SPSLNLLNLR
0301: NNSLSGRLML NCTAMIALNS LDLGTNRFNG RLPENLPDCK RLKNVNLARN TFHGQVPESF KNFESLSYFS LSNSSLANIS SALGILQHCK NLTTLVLTLN
0401: FHGEALPDDS SLHFEKLKVL VVANCRLTGS MPRWLSSSNE LQLLDLSWNR LTGAIPSWIG DFKALFYLDL SNNSFTGEIP KSLTKLESLT SRNISVNEPS
0501: PDFPFFMKRN ESARALQYNQ IFGFPPTIEL GHNNLSGPIW EEFGNLKKLH VFDLKWNALS GSIPSSLSGM TSLEALDLSN NRLSGSIPVS LQQLSFLSKF
0601: SVAYNNLSGV IPSGGQFQTF PNSSFESNHL CGEHRFPCSE GTESALIKRS RRSRGGDIGM AIGIAFGSVF LLTLLSLIVL RARRRSGEVD PEIEESESMN
0701: RKELGEIGSK LVVLFQSNDK ELSYDDLLDS TNSFDQANII GCGGFGMVYK ATLPDGKKVA IKKLSGDCGQ IEREFEAEVE TLSRAQHPNL VLLRGFCFYK
0801: NDRLLIYSYM ENGSLDYWLH ERNDGPALLK WKTRLRIAQG AAKGLLYLHE GCDPHILHRD IKSSNILLDE NFNSHLADFG LARLMSPYET HVSTDLVGTL
0901: GYIPPEYGQA SVATYKGDVY SFGVVLLELL TDKRPVDMCK PKGCRDLISW VVKMKHESRA SEVFDPLIYS KENDKEMFRV LEIACLCLSE NPKQRPTTQQ
1001: LVSWLDDV
Arabidopsis Description
PSKR1Phytosulfokine receptor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.