Factsheet for Os02t0156400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G128500.1	Wheat	extracellular	43.18	69.51
TraesCS6D01G117200.1	Wheat	plasma membrane	65.6	67.38
TraesCS6B01G155400.1	Wheat	extracellular	21.17	67.26
TraesCS6B01G155000.1	Wheat	plasma membrane	65.18	66.95
TraesCS6D01G116900.1	Wheat	extracellular, plasma membrane	64.76	66.91
TraesCS6B01G154700.1	Wheat	extracellular	63.93	66.04
TraesCS6D01G117900.1	Wheat	plasma membrane, vacuole	42.9	65.67
TraesCS6D01G117400.1	Wheat	plasma membrane, vacuole	64.62	65.26
TraesCS6A01G128100.1	Wheat	plasma membrane	64.62	65.26
HORVU6Hr1G024660.4	Barley	extracellular, plasma membrane	64.62	65.26
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	64.48	65.12
TraesCS6A01G128400.1	Wheat	plasma membrane	63.79	64.42
TraesCS6B01G156800.2	Wheat	endoplasmic reticulum, plasma membrane	49.86	64.16
TraesCS6B01G155300.1	Wheat	cytosol, golgi, plasma membrane	36.07	64.11
TraesCS6D01G118000.1	Wheat	plastid	65.74	63.87
TraesCS6B01G157000.1	Wheat	plasma membrane, plastid	65.46	63.6
TraesCS6A01G128600.1	Wheat	cytosol, extracellular, golgi	13.79	63.46
TraesCS6D01G116800.1	Wheat	vacuole	32.59	63.24
EES06299	Sorghum	plasma membrane	62.67	63.2
Os02t0155900-00	Rice	cytosol	20.75	62.87
TraesCS6A01G126700.1	Wheat	cytosol, golgi, peroxisome	40.81	62.34
TraesCS6B01G154600.1	Wheat	cytosol, golgi, plasma membrane	38.3	60.71
HORVU6Hr1G031910.6	Barley	endoplasmic reticulum, vacuole	63.65	58.74
Os02t0156600-00	Rice	plasma membrane	57.52	58.17
Os02t0157400-01	Rice	extracellular, vacuole	11.98	57.72
Os02t0156800-01	Rice	extracellular, vacuole	11.98	57.72
OQU84820	Sorghum	extracellular, plastid, vacuole	27.16	57.52
Os02t0155400-01	Rice	plasma membrane	58.22	57.5
Os02t0156200-00	Rice	plasma membrane	57.66	56.87
Os02t0157100-00	Rice	extracellular	20.06	56.03
Os02t0156633-00	Rice	mitochondrion	53.2	55.6
Os02t0157200-00	Rice	plasma membrane	55.01	55.01
Os02t0515125-00	Rice	plasma membrane	49.58	54.43
Os02t0155700-00	Rice	plasma membrane	44.99	53.39
Zm00001d005908_P001	Maize	plastid	30.22	50.35
Os02t0153100-00	Rice	plasma membrane	69.92	47.76
Os02t0153200-01	Rice	plasma membrane	68.8	47.05
TraesCS6A01G124300.1	Wheat	plasma membrane	66.71	45.62
TraesCS6B01G152300.1	Wheat	plasma membrane	66.02	45.45
TraesCS6D01G114600.1	Wheat	plasma membrane	66.43	45.39
Os02t0157501-00	Rice	cytosol	11.42	45.05
HORVU6Hr1G023090.1	Barley	plasma membrane, plastid	65.04	43.52
Os02t0154000-00	Rice	plasma membrane	59.19	40.63
Os02t0153700-01	Rice	plasma membrane	59.05	40.5
Os02t0153400-00	Rice	plasma membrane	59.89	40.45
Os02t0153500-00	Rice	plasma membrane	59.05	40.42
Os02t0154200-01	Rice	plasma membrane	58.91	40.32
Os02t0153900-01	Rice	plasma membrane	57.66	39.39
CDX83918	Canola	mitochondrion, plasma membrane	37.05	39.0
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	36.77	38.71
CDX96780	Canola	mitochondrion, plasma membrane	36.77	38.71
TraesCS6A01G129000.1	Wheat	plasma membrane	64.48	38.42
AT1G17240.2	Thale cress	plasma membrane	38.72	37.87
Os06t0691800-01	Rice	plasma membrane	54.46	36.68
AT1G17250.1	Thale cress	plasma membrane	38.02	36.11
CDX81812	Canola	extracellular, plasma membrane	25.07	33.46
Os04t0672600-01	Rice	extracellular, plasma membrane	33.15	33.06
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	13.09	32.64
KRH06825	Soybean	cytosol, extracellular, nucleus	5.99	31.62
CDY48482	Canola	plasma membrane	28.55	29.84
Os06t0692500-00	Rice	plasma membrane	43.45	29.35
Os06t0692100-01	Rice	plasma membrane	42.34	29.04
Os06t0692300-00	Rice	plasma membrane	42.34	28.25
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	40.95	27.27
Solyc03g123780.2.1	Tomato	plasma membrane	34.12	26.43
KRH06301	Soybean	plasma membrane	38.86	26.2
KRH47735	Soybean	plasma membrane	35.93	26.01
Bra016068.1-P	Field mustard	plasma membrane	38.72	25.57
CDX96394	Canola	plasma membrane	38.72	25.55
Bra008027.1-P	Field mustard	plasma membrane	38.3	25.53
CDX82157	Canola	plasma membrane	37.88	25.26
KRH68996	Soybean	plasma membrane	34.82	25.25
AT1G72300.1	Thale cress	plasma membrane	38.3	25.11
PGSC0003DMT400023733	Potato	plasma membrane	37.33	24.63
Os06t0692600-01	Rice	extracellular	36.07	24.3
Os07t0107800-01	Rice	plasma membrane	34.54	23.96
Os04t0672100-01	Rice	plasma membrane	33.01	23.42
Os02t0629400-01	Rice	plasma membrane	34.26	23.38
Os02t0116700-01	Rice	plasma membrane	34.4	23.3
CDY03644	Canola	plasma membrane	27.72	23.06
Os02t0155600-00	Rice	cytosol, peroxisome, plastid	13.51	14.5
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EMBL:AK100447	ProteinID:BAD28161.1	ProteinID:BAF07856.1	ProteinID:BAS77057.1
ProteinID:EEE56333.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	EnsemblPlantsGene:Os02g0156400	EnsemblPlants:Os02t0156400-01	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF1	UniProt:Q6ET59	SMART:SM00365
SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00003CE624	SEG:seg

Description

Leucine-rich repeat, N-terminal domain containing protein. (Os02t0156400-01)

Coordinates

chr2:-:3092570..3095103

Molecular Weight (calculated)

78105.8 Da

IEP (calculated)

6.180

GRAVY (calculated)

0.035

Length

718 amino acids

Sequence
(BLAST)

001: MKPMPRQLSS SSNRDNSRFC MPPFGQALLL LLLCFVCHAG SCTEQERESL LQFLSGLSND GGLGVSWQNG TDCCTWEGIT CSGNGAVVEV ISLASRGLEG
101: SISPSLGDLT GLLRLNLSRN SLSGGLPLEL VSSSSIVVLD VSFNYLTGGL SELPSSTPDR PLQVLNISSN LFTGNFPSTT WERMNNLVVL NASNNRFTGQ
201: MPTSFCASAP SFAVLELSYN QFSGRIPAGL SNCSKLTLLS ASYNNLTGTL PDELFDLTSL KHLCFLRNQL EGSIKGITKL KNLVTIDLGQ NRLSGSIPNS
301: IGQLKRLEKL HLAYNSMSGE LPSTVGNCRN LKNMNLGGNN FSGDLGNVNF STLRNLQSLD LMSNNFTGTV PESIYSCRNL SALQLSNNSF HGQLSEKIRN
401: LKCLSFVSLV DISLTNITGS LQILQSCRNL TTLLIGYNFM QETMPEDDEI YGFENLRIFS LNDCSLSGKI PKWLSKLTNL EMLSLYNNQL NGAIPDWISS
501: LNFLFHIDIS NNSLSGEIPS ALVEMPMLKS DNVPPKVFEL PICTGYALQY RINSAFPKVL NLGINNFTGI IPNEIGQLKA LQLLNLSSNR LSGEIPESIY
601: KLTNLQVLDL SSNNLTGTIP DGLNKLHFLS AFNISNNDLE GPVPNAGQLS TFPSTSFDGN PKLCGPMLAR HCGLAQTPFV STKQNADKVV SSFVFMISFG
701: AFFAVGVLYD QIVLSRFF

Best Arabidopsis Sequence Match ( AT1G17250.1 )
(BLAST)

001: MTNEGRFKAK GFVRTSSTTR PIQALSFHMI GILLQCVLFI SVLSIAVSEA LCNSQDRESL LWFSGNVSSS VSPLNWNPSI DCCSWEGITC DDSPDSHITA
101: ISLPFRALYG KLPLSVLRLH HLSQLNLSHN RLSGHLPSGF LSALDQLKVL DLSYNSLDGE LPVEQTFRNG SNRCFPIRIV DLSSNFLQGE ILPSSIFMQG
201: TFDLISFNVS KNSFTGSIPS FMCKSSPQLS KLDFSYNDFT GNIPQGLGRC LKLSVLQAGF NNISGEIPSD IYNLSELEQL FLPVNHLSGK INDDITHLTK
301: LKSLELYSNH LGGEIPMDIG QLSRLQSLQL HINNITGTVP PSLANCTNLV KLNLRLNRLE GTLSELDFSR FQSLSILDLG NNSFSGDFPW RVHSCKSLSA
401: MRFASNKLTG QISPHVLELE SLSILSLSDN KLMNITGALG ILQGCRNLST LLIGKNFYNE TFPSDKDLIS SDGFPNLQIF ASGGSGLRGE IPAWLIKLKS
501: LAVIDLSHNQ LVGSIPGWLG TFPHLFYIDL SENLLSGELP KDLFQLKALM SQKAYDATER NYLKLPVFVS PNNVTTHQQY NQLFSLPPGI YIRRNNLKGS
601: IPIEVGQLKV LHVLELSHNY LSGIIPHELS KLTSLERLDL SNNHLSGRIP WSLTSLHYMS YFNVVNNSLD GPIPTGSQFD TFPQANFKGN PLLCGGILLT
701: SCKASTKLPA TTTNKADTED EEELKFIFIL GVATGFFVSY CFYWCFFARL DAFISK

Arabidopsis Description

AtRLP3RLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.