Factsheet for TraesCS6D01G117400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G126900.1	Wheat	plasma membrane, vacuole	94.94	94.94
TraesCS6B01G155300.1	Wheat	cytosol, golgi, plasma membrane	52.6	92.57
TraesCS6B01G155400.1	Wheat	extracellular	29.11	91.59
TraesCS6D01G117200.1	Wheat	plasma membrane	78.34	79.69
TraesCS6D01G117900.1	Wheat	plasma membrane, vacuole	52.04	78.89
TraesCS6D01G116900.1	Wheat	extracellular, plasma membrane	76.65	78.42
HORVU6Hr1G024660.4	Barley	extracellular, plasma membrane	76.37	76.37
TraesCS6D01G116800.1	Wheat	vacuole	39.66	76.22
TraesCS6D01G118000.1	Wheat	plastid	78.48	75.51
Os02t0156400-01	Rice	cytosol, mitochondrion, plasma membrane, vacuole	65.26	64.62
EES06299	Sorghum	plasma membrane	63.29	63.2
OQU84820	Sorghum	extracellular, plastid, vacuole	29.82	62.54
TraesCS6D01G117600.1	Wheat	cytosol, golgi, peroxisome	57.95	62.42
TraesCS7D01G441600.1	Wheat	cytosol, plasma membrane	40.93	62.18
TraesCS6D01G116700.1	Wheat	plasma membrane	61.18	60.59
TraesCS6D01G119500.1	Wheat	extracellular, plasma membrane, vacuole	60.06	59.97
TraesCS6D01G119100.1	Wheat	cytosol, golgi, peroxisome	33.9	59.95
TraesCS6D01G118900.1	Wheat	extracellular	59.49	59.58
TraesCS6D01G116500.1	Wheat	plasma membrane	59.63	59.55
TraesCS6D01G081500.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	40.51	59.5
TraesCS6D01G115800.1	Wheat	plasma membrane	62.17	59.49
TraesCS6D01G119600.1	Wheat	plasma membrane	59.07	58.91
TraesCS6D01G119000.1	Wheat	plasma membrane	24.89	58.22
TraesCS4D01G038100.1	Wheat	extracellular	56.96	56.72
TraesCS6D01G116600.1	Wheat	plastid	45.85	56.6
TraesCS7D01G401700.1	Wheat	golgi, vacuole	49.93	55.99
TraesCS6D01G119400.1	Wheat	plastid	55.7	54.92
TraesCS7D01G425500.1	Wheat	plasma membrane	54.71	54.56
TraesCS7D01G425600.1	Wheat	plasma membrane	55.13	53.26
Zm00001d005908_P001	Maize	plastid	30.94	51.04
TraesCS6D01G114600.1	Wheat	plasma membrane	74.68	50.52
Os02t0153100-00	Rice	plasma membrane	68.07	46.05
Os02t0153200-01	Rice	plasma membrane	67.79	45.9
TraesCS6D01G114800.1	Wheat	plasma membrane	65.12	43.6
TraesCS6D01G116100.1	Wheat	plasma membrane	63.99	43.33
TraesCS6D01G115200.2	Wheat	plasma membrane	63.71	43.1
TraesCS6D01G115700.1	Wheat	plasma membrane	62.87	42.21
TraesCS6D01G115300.1	Wheat	plasma membrane	61.88	41.94
TraesCS6D01G115900.1	Wheat	plasma membrane	60.62	41.89
TraesCS6D01G115400.1	Wheat	plasma membrane	62.03	41.68
TraesCS6D01G115100.1	Wheat	plasma membrane	61.18	41.39
TraesCS6D01G115000.1	Wheat	plasma membrane	53.87	38.57
TraesCS7D01G426000.1	Wheat	plasma membrane	56.54	37.82
CDX83918	Canola	mitochondrion, plasma membrane	36.15	37.68
TraesCS6D01G116000.1	Wheat	plasma membrane	46.13	37.61
CDX96780	Canola	mitochondrion, plasma membrane	36.01	37.54
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	36.01	37.54
AT1G17240.2	Thale cress	plasma membrane	37.69	36.51
AT1G17250.1	Thale cress	plasma membrane	37.83	35.58
CDX81812	Canola	extracellular, plasma membrane	25.46	33.64
TraesCS2D01G551700.1	Wheat	plastid	27.29	33.51
TraesCS2D01G551600.1	Wheat	extracellular, plasma membrane, vacuole	34.32	32.75
TraesCS2D01G551800.1	Wheat	extracellular, plasma membrane	32.77	30.62
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.24	30.21
KRH06825	Soybean	cytosol, extracellular, nucleus	5.77	30.15
CDY48482	Canola	plasma membrane	28.13	29.11
TraesCS7D01G425700.1	Wheat	plasma membrane	43.74	28.74
Solyc03g123780.2.1	Tomato	plasma membrane	35.87	27.51
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	41.35	27.27
KRH06301	Soybean	plasma membrane	40.51	27.04
KRH47735	Soybean	plasma membrane	37.69	27.02
KRH68996	Soybean	plasma membrane	37.27	26.77
PGSC0003DMT400023733	Potato	plasma membrane	39.52	25.83
Bra016068.1-P	Field mustard	plasma membrane	38.68	25.3
CDX96394	Canola	plasma membrane	38.68	25.28
Bra008027.1-P	Field mustard	plasma membrane	38.12	25.16
CDX82157	Canola	plasma membrane	37.83	24.98
TraesCS2D01G551200.1	Wheat	plasma membrane	35.87	24.43
AT1G72300.1	Thale cress	plasma membrane	37.41	24.29
TraesCS2D01G263500.1	Wheat	plasma membrane	34.18	23.87
TraesCS6D01G052100.1	Wheat	plasma membrane	36.01	23.75
TraesCS6D01G213000.1	Wheat	plasma membrane	34.74	23.48
CDY03644	Canola	plasma membrane	28.13	23.18
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G117400.1	EnsemblPlantsGene:TraesCS6D01G117400	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR43932	PANTHER:PTHR43932:SF1	PFAM:PF08263	PFAM:PF13516	PRINTS:PR00019	SEG:seg
SignalP:SignalP-noTM	SMART:SM00369	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:83158297..83160432

Molecular Weight (calculated)

76957.8 Da

IEP (calculated)

5.315

GRAVY (calculated)

0.163

Length

711 amino acids

Sequence
(BLAST)

001: MQPLSHSHRN GFPVPFFGLA LVLLVCLDSP TSSCTDQEKS SLLQLLTGLS SDGGLTASWR IDTDCCTWEG ITCNQDRIVT DVSLASRGLK GSISPFLGNL
101: TGLLRLNLSQ NSLSGGLPLE LVSSSSILVL DVSFNCLTGG LSELPSSTPA RPLQVLNISS NFFTGRFPST TWEVMKSLVV LNASTNSFTG QIPTTPCVSA
201: PSFAVLELSF NQLSGNIPPG LGNCLALKLL SAGYNNLNGT LPDELFKVRS LQYISLPNNR LEGALNGIIN LTNLVTLDLG KNELSGNIPD SIGELKRLEE
301: IHLGHNNMSG ELPSALSNCT NLITVDLKAN QFSGELTKVN FVSLSKLRKL DLVFNDFTGT IPESIYSCSK LTALRLSYNH FHGQLSEKIG NLKSLRFLSL
401: VNLSLTNIKR TLQILESSRS LNTLFIGFNF LHETMPEDDS IDGFENLQVL SMSYCSMSGT IPDWLSKLTN LGMLFLQGNQ LTGPIPDWIS TLNFLFHLDI
501: SNNSFTGEIS TALAEMPMLK SDKIAAKAFF ELPVYVFSPF IQYINAGACP KVLNLAVNKF TGVIPGEMGQ LRALVSLNLS YNKLSGEIPQ PICNLTNLQM
601: LDLSSNHLTG TILAALNNLH FLSKFNISDN DLEGPIPTVG QLSTFPDSSF DGNPKLCGPM IVNHCGSAEA GPESIISREQ IGSKVIFAIS FGAFFGVGVL
701: YDQMVLARYF G

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.