Factsheet for TraesCS6D01G116600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G126200.1	Wheat	plasma membrane	91.84	73.88
TraesCS6B01G154200.1	Wheat	vacuole	58.85	69.9
TraesCS6D01G081500.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	49.31	58.68
TraesCS6D01G117600.1	Wheat	cytosol, golgi, peroxisome	61.11	53.33
TraesCS6B01G154400.1	Wheat	plastid	25.0	52.55
TraesCS6D01G119100.1	Wheat	cytosol, golgi, peroxisome	36.63	52.49
TraesCS6D01G116500.1	Wheat	plasma membrane	62.85	50.84
TraesCS6D01G116700.1	Wheat	plasma membrane	61.46	49.3
TraesCS6D01G115800.1	Wheat	plasma membrane	63.19	48.99
TraesCS6D01G116900.1	Wheat	extracellular, plasma membrane	57.64	47.77
TraesCS6D01G117200.1	Wheat	plasma membrane	57.29	47.21
OQU84395	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	58.16	46.59
TraesCS6D01G117400.1	Wheat	plasma membrane, vacuole	56.6	45.85
TraesCS7D01G441600.1	Wheat	cytosol, plasma membrane	36.98	45.51
OQU84402	Sorghum	endoplasmic reticulum, vacuole	40.28	45.4
TraesCS6D01G118000.1	Wheat	plastid	58.16	45.33
TraesCS6D01G119500.1	Wheat	extracellular, plasma membrane, vacuole	55.73	45.08
TraesCS6D01G118900.1	Wheat	extracellular	55.56	45.07
TraesCS6D01G117900.1	Wheat	plasma membrane, vacuole	36.63	44.99
TraesCS6D01G119600.1	Wheat	plasma membrane	55.56	44.88
TraesCS7D01G401700.1	Wheat	golgi, vacuole	49.31	44.8
TraesCS7D01G425500.1	Wheat	plasma membrane	53.99	43.62
TraesCS6D01G119400.1	Wheat	plastid	54.51	43.55
TraesCS7D01G425600.1	Wheat	plasma membrane	55.38	43.34
TraesCS4D01G038100.1	Wheat	extracellular	53.65	43.28
KXG29504	Sorghum	plasma membrane	44.44	42.6
TraesCS6D01G116800.1	Wheat	vacuole	25.52	39.73
TraesCS6D01G116000.1	Wheat	plasma membrane	59.55	39.33
TraesCS6D01G115200.2	Wheat	plasma membrane	67.36	36.92
TraesCS6D01G114800.1	Wheat	plasma membrane	67.88	36.82
TraesCS6D01G115300.1	Wheat	plasma membrane	67.01	36.8
TraesCS6D01G116100.1	Wheat	plasma membrane	65.97	36.19
TraesCS6D01G115700.1	Wheat	plasma membrane	65.62	35.69
TraesCS6D01G119000.1	Wheat	plasma membrane	18.75	35.53
KXG29501	Sorghum	plasma membrane	64.93	35.35
TraesCS6D01G115400.1	Wheat	plasma membrane	64.58	35.16
TraesCS6D01G115100.1	Wheat	plasma membrane	63.89	35.01
KRH06825	Soybean	cytosol, extracellular, nucleus	7.99	33.82
TraesCS6D01G115900.1	Wheat	plasma membrane	60.42	33.82
TraesCS6D01G114600.1	Wheat	plasma membrane	61.63	33.78
TraesCS2D01G551700.1	Wheat	plastid	33.85	33.68
Os02t0153400-00	Rice	plasma membrane	61.98	33.58
TraesCS6D01G115000.1	Wheat	plasma membrane	57.29	33.23
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	16.49	32.99
CDX83918	Canola	mitochondrion, plasma membrane	38.54	32.55
CDX96780	Canola	mitochondrion, plasma membrane	38.54	32.55
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	38.37	32.4
TraesCS7D01G426000.1	Wheat	plasma membrane	58.16	31.51
AT1G17240.2	Thale cress	plasma membrane	39.93	31.34
Zm00001d015298_P001	Maize	cytosol, plasma membrane, plastid	32.99	29.37
AT1G17250.1	Thale cress	plasma membrane	38.54	29.37
TraesCS2D01G551600.1	Wheat	extracellular, plasma membrane, vacuole	35.07	27.11
CDX81812	Canola	extracellular, plasma membrane	24.65	26.39
TraesCS2D01G551800.1	Wheat	extracellular, plasma membrane	34.38	26.02
TraesCS7D01G425700.1	Wheat	plasma membrane	44.27	23.57
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	43.75	23.38
Solyc03g123780.2.1	Tomato	plasma membrane	37.33	23.19
KRH06301	Soybean	plasma membrane	42.88	23.19
CDY48482	Canola	plasma membrane	27.6	23.14
TraesCS2D01G263500.1	Wheat	plasma membrane	39.93	22.59
KRH68996	Soybean	plasma membrane	38.72	22.53
Bra008027.1-P	Field mustard	plasma membrane	41.32	22.1
KRH47735	Soybean	plasma membrane	38.02	22.08
CDX82157	Canola	plasma membrane	40.97	21.91
Bra016068.1-P	Field mustard	plasma membrane	40.97	21.71
CDX96394	Canola	plasma membrane	40.97	21.69
PGSC0003DMT400023733	Potato	plasma membrane	40.97	21.69
AT1G72300.1	Thale cress	plasma membrane	40.8	21.46
TraesCS6D01G052100.1	Wheat	plasma membrane	38.37	20.5
TraesCS2D01G551200.1	Wheat	plasma membrane	37.15	20.5
CDY03644	Canola	plasma membrane	30.21	20.16
TraesCS6D01G213000.1	Wheat	plasma membrane	36.63	20.06
CDY72222	Canola	cytosol, nucleus, plastid	0.17	0.98

Protein Annotations

EnsemblPlants:TraesCS6D01G116600.1	EnsemblPlantsGene:TraesCS6D01G116600	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR43932	PANTHER:PTHR43932:SF8	PFAM:PF00560	PFAM:PF12799	PFAM:PF13855	PRINTS:PR00019
SEG:seg	SMART:SM00369	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:82962480..82964210

Molecular Weight (calculated)

62994.0 Da

IEP (calculated)

5.133

GRAVY (calculated)

0.071

Length

576 amino acids

Sequence
(BLAST)

001: MQELPSSTPS RPLQVLNISR NLSTGRFPSS TTWEVMDNLV VLNASNNSFT GLIPDNFCSS SSLLAVVELC YNQFTGIIPP GLCNCSMLRV LKAGHNNLRG
101: TLPNELFDAS LLEYLSLPSN VLDGVLDGAQ IIKLSNLVTL DLGGNNFSGK IPDSIGELER LEVLHLDYNN MSGELPSALS NCTNLVTINF KSNNLSGELS
201: KVNFSTLPRL KTLDVLYNNF NGRVPESLYT CSNLTALRLS GNNLHGQLSP RIGNMKHLTF LSLAINSFTN ITNALHILQR CTNLNTLLMG SSLRGELMPE
301: DDFIDGFENL QVLSLNDCSL LGKIPLWISK LAKLEMLILS ENQLTGSIPA WIEDLKYLFY LDISNNSLTG EIPTNLLDMQ MLQSEKTTTS LDPRVFELPV
401: YKGPSLQYLI PIAFAKVLDL SNNKLTGEIP PEIGQLKSLL SLNLSFNALR GQIPISVCNL RNLQILDFSN NNLTGAIPAA LNSLYFLSAF NVSNNDLEGP
501: IPSGGQFNTF QNSCFDGNPK LCGSILTHKC GPASTPPPTT MATKQTDYKA AFAIAFSAFF GVGVLYDQLV LSRFLR

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.