Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G119500.1 | Wheat | extracellular, plasma membrane, vacuole | 84.33 | 47.61 |
| TraesCS6A01G129700.1 | Wheat | extracellular, plasma membrane, vacuole | 81.84 | 46.21 |
| TraesCS6D01G081500.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 55.22 | 45.87 |
| TraesCS6D01G119600.1 | Wheat | plasma membrane | 81.09 | 45.72 |
| TraesCS6D01G118900.1 | Wheat | extracellular | 78.11 | 44.23 |
| Os02t0155700-00 | Rice | plasma membrane | 57.96 | 38.51 |
| TraesCS4D01G038100.1 | Wheat | extracellular | 67.16 | 37.82 |
| HORVU6Hr1G024800.2 | Barley | cytosol, plasma membrane | 74.63 | 37.69 |
| TraesCS6D01G116600.1 | Wheat | plastid | 52.49 | 36.63 |
| TraesCS6D01G117600.1 | Wheat | cytosol, golgi, peroxisome | 57.46 | 35.0 |
| TraesCS6D01G116900.1 | Wheat | extracellular, plasma membrane | 60.2 | 34.82 |
| TraesCS6D01G117400.1 | Wheat | plasma membrane, vacuole | 59.95 | 33.9 |
| TraesCS6D01G117200.1 | Wheat | plasma membrane | 58.46 | 33.62 |
| TraesCS6D01G118000.1 | Wheat | plastid | 60.95 | 33.15 |
| EES06303 | Sorghum | plasma membrane | 60.45 | 33.06 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 10.7 | 31.62 |
| TraesCS6D01G116700.1 | Wheat | plasma membrane | 55.72 | 31.2 |
| TraesCS6D01G115800.1 | Wheat | plasma membrane | 57.21 | 30.96 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 22.14 | 30.9 |
| TraesCS6D01G116500.1 | Wheat | plasma membrane | 54.73 | 30.9 |
| TraesCS7D01G425500.1 | Wheat | plasma membrane | 49.5 | 27.91 |
| TraesCS7D01G425600.1 | Wheat | plasma membrane | 50.25 | 27.45 |
| TraesCS6D01G116000.1 | Wheat | plasma membrane | 59.2 | 27.29 |
| TraesCS7D01G401700.1 | Wheat | golgi, vacuole | 42.29 | 26.81 |
| TraesCS6D01G119400.1 | Wheat | plastid | 47.76 | 26.63 |
| CDX81812 | Canola | extracellular, plasma membrane | 32.34 | 24.16 |
| TraesCS2D01G551700.1 | Wheat | plastid | 34.08 | 23.66 |
| TraesCS7D01G441600.1 | Wheat | cytosol, plasma membrane | 27.36 | 23.5 |
| TraesCS6D01G114600.1 | Wheat | plasma membrane | 61.19 | 23.41 |
| TraesCS6D01G116100.1 | Wheat | plasma membrane | 60.7 | 23.24 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 39.3 | 23.17 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 39.05 | 23.02 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 38.81 | 22.87 |
| TraesCS6D01G115900.1 | Wheat | plasma membrane | 58.46 | 22.84 |
| TraesCS6D01G114800.1 | Wheat | plasma membrane | 59.95 | 22.69 |
| TraesCS6D01G115300.1 | Wheat | plasma membrane | 59.2 | 22.69 |
| TraesCS6D01G115200.2 | Wheat | plasma membrane | 58.96 | 22.55 |
| TraesCS6D01G115400.1 | Wheat | plasma membrane | 59.2 | 22.5 |
| TraesCS6D01G115700.1 | Wheat | plasma membrane | 58.71 | 22.29 |
| TraesCS6D01G115100.1 | Wheat | plasma membrane | 57.46 | 21.98 |
| AT1G17240.2 | Thale cress | plasma membrane | 38.06 | 20.84 |
| TraesCS7D01G426000.1 | Wheat | plasma membrane | 54.48 | 20.6 |
| AT1G17250.1 | Thale cress | plasma membrane | 38.56 | 20.5 |
| TraesCS6D01G117900.1 | Wheat | plasma membrane, vacuole | 22.89 | 19.62 |
| TraesCS2D01G551600.1 | Wheat | extracellular, plasma membrane, vacuole | 35.32 | 19.06 |
| TraesCS6D01G115000.1 | Wheat | plasma membrane | 46.52 | 18.83 |
| TraesCS2D01G551800.1 | Wheat | extracellular, plasma membrane | 34.08 | 18.0 |
| KRH47735 | Soybean | plasma membrane | 43.28 | 17.54 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 46.52 | 17.35 |
| KRH06301 | Soybean | plasma membrane | 44.03 | 16.62 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 37.06 | 16.07 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 43.03 | 15.9 |
| TraesCS7D01G425700.1 | Wheat | plasma membrane | 42.79 | 15.9 |
| KRH68996 | Soybean | plasma membrane | 37.56 | 15.25 |
| CDY03644 | Canola | plasma membrane | 32.59 | 15.18 |
| CDX82157 | Canola | plasma membrane | 40.55 | 15.13 |
| Bra008027.1-P | Field mustard | plasma membrane | 40.55 | 15.13 |
| TraesCS2D01G263500.1 | Wheat | plasma membrane | 38.31 | 15.13 |
| Bra016068.1-P | Field mustard | plasma membrane | 40.3 | 14.9 |
| CDX96394 | Canola | plasma membrane | 40.3 | 14.89 |
| AT1G72300.1 | Thale cress | plasma membrane | 40.05 | 14.7 |
| CDY48482 | Canola | plasma membrane | 25.12 | 14.7 |
| TraesCS6D01G213000.1 | Wheat | plasma membrane | 36.82 | 14.07 |
| TraesCS2D01G551200.1 | Wheat | plasma membrane | 35.82 | 13.79 |
| TraesCS6D01G052100.1 | Wheat | plasma membrane | 36.82 | 13.73 |
| TraesCS6D01G116800.1 | Wheat | vacuole | 7.46 | 8.11 |
| TraesCS6D01G119000.1 | Wheat | plasma membrane | 0.0 | 0.0 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G119100.1 | EnsemblPlantsGene:TraesCS6D01G119100 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR43932 |
| PANTHER:PTHR43932:SF12 | PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | SEG:seg |
| SMART:SM00369 | SUPFAM:SSF52058 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6D:-:84229671..84230879
Molecular Weight (calculated)
44354.9 Da
IEP (calculated)
8.213
GRAVY (calculated)
0.095
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNCTNLKTI DLKINNFTGD LGKVNFATLQ NLKSLDLMEN NLGGIVPESI YSCSNLTALR LSANHFHGEI SLRIGNLKHL SFVSLSRNSF TNITKALHAL
101: KSCRNISTLL IGRNFMNEAM PQDESIDGFQ NLQFLAMHQC SLTGRIPTWL SKLTRLKVLV LSKNQLTGPM PSWINSLNNL FHLDVSNNSL SGKIPVTLME
201: MAMLKSDKPA IYLDPSLVDL DLLIYAVDAS KLQYRINSDW CKVLNLGNNK FTGVIPQEIG QLKALLYLNL SSNNFYGEIP QSIGNLTNLQ RLDLSNNHLT
301: GEIPAALEIL HFLSEFTISN NDLEGPIPTT GQLSTFQASS FNGNPKLCGP MLINHCSSVE AAPISIISAK KCSSKVIFVT AFGVFFGVGV LYDQLVLFRY
401: FG
101: KSCRNISTLL IGRNFMNEAM PQDESIDGFQ NLQFLAMHQC SLTGRIPTWL SKLTRLKVLV LSKNQLTGPM PSWINSLNNL FHLDVSNNSL SGKIPVTLME
201: MAMLKSDKPA IYLDPSLVDL DLLIYAVDAS KLQYRINSDW CKVLNLGNNK FTGVIPQEIG QLKALLYLNL SSNNFYGEIP QSIGNLTNLQ RLDLSNNHLT
301: GEIPAALEIL HFLSEFTISN NDLEGPIPTT GQLSTFQASS FNGNPKLCGP MLINHCSSVE AAPISIISAK KCSSKVIFVT AFGVFFGVGV LYDQLVLFRY
401: FG
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.