Factsheet for TraesCS6D01G119600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G158200.1	Wheat	extracellular, plasma membrane, vacuole	97.48	97.48
TraesCS6D01G119100.1	Wheat	cytosol, golgi, peroxisome	45.72	81.09
TraesCS6D01G119500.1	Wheat	extracellular, plasma membrane, vacuole	80.93	81.04
TraesCS6D01G119000.1	Wheat	plasma membrane	34.5	80.92
TraesCS6D01G118900.1	Wheat	extracellular	79.52	79.86
TraesCS4D01G038100.1	Wheat	extracellular	68.02	67.93
HORVU6Hr1G024800.2	Barley	cytosol, plasma membrane	73.49	65.83
TraesCS6D01G116900.1	Wheat	extracellular, plasma membrane	60.45	62.01
TraesCS6D01G117600.1	Wheat	cytosol, golgi, peroxisome	55.82	60.3
TraesCS6D01G117400.1	Wheat	plasma membrane, vacuole	58.91	59.07
TraesCS6D01G117200.1	Wheat	plasma membrane	57.78	58.94
TraesCS7D01G441600.1	Wheat	cytosol, plasma membrane	38.43	58.55
TraesCS6D01G116700.1	Wheat	plasma membrane	58.34	57.94
TraesCS6D01G081500.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	39.27	57.85
TraesCS6D01G117900.1	Wheat	plasma membrane, vacuole	37.87	57.57
TraesCS6D01G116500.1	Wheat	plasma membrane	57.22	57.3
TraesCS6D01G118000.1	Wheat	plastid	58.91	56.83
EES06303	Sorghum	plasma membrane	58.49	56.73
Os02t0155700-00	Rice	plasma membrane	48.11	56.69
TraesCS6D01G116800.1	Wheat	vacuole	29.31	56.49
TraesCS6D01G115800.1	Wheat	plasma membrane	58.77	56.39
TraesCS6D01G116600.1	Wheat	plastid	44.88	55.56
TraesCS7D01G401700.1	Wheat	golgi, vacuole	48.39	54.42
TraesCS7D01G425600.1	Wheat	plasma membrane	53.02	51.36
TraesCS6D01G119400.1	Wheat	plastid	51.89	51.32
TraesCS7D01G425500.1	Wheat	plasma membrane	50.63	50.63
TraesCS6D01G116100.1	Wheat	plasma membrane	61.43	41.71
TraesCS6D01G115700.1	Wheat	plasma membrane	61.29	41.27
TraesCS6D01G115200.2	Wheat	plasma membrane	60.17	40.82
TraesCS6D01G114600.1	Wheat	plasma membrane	60.17	40.82
TraesCS6D01G114800.1	Wheat	plasma membrane	60.03	40.3
TraesCS6D01G115300.1	Wheat	plasma membrane	59.19	40.23
TraesCS6D01G115400.1	Wheat	plasma membrane	59.19	39.89
TraesCS6D01G115100.1	Wheat	plasma membrane	58.49	39.68
TraesCS6D01G115900.1	Wheat	plasma membrane	57.22	39.65
TraesCS6D01G115000.1	Wheat	plasma membrane	52.59	37.76
CDX83918	Canola	mitochondrion, plasma membrane	35.9	37.54
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	35.76	37.39
TraesCS6D01G116000.1	Wheat	plasma membrane	45.72	37.39
CDX96780	Canola	mitochondrion, plasma membrane	35.62	37.24
AT1G17240.2	Thale cress	plasma membrane	38.29	37.19
TraesCS7D01G426000.1	Wheat	plasma membrane	55.12	36.97
AT1G17250.1	Thale cress	plasma membrane	37.87	35.71
CDX81812	Canola	extracellular, plasma membrane	24.96	33.09
TraesCS2D01G551700.1	Wheat	plastid	25.95	31.95
TraesCS2D01G551600.1	Wheat	extracellular, plasma membrane, vacuole	33.38	31.95
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.48	30.9
KRH06825	Soybean	cytosol, extracellular, nucleus	5.89	30.88
TraesCS2D01G551800.1	Wheat	extracellular, plasma membrane	32.82	30.75
TraesCS7D01G425700.1	Wheat	plasma membrane	44.6	29.39
CDY48482	Canola	plasma membrane	27.91	28.97
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	43.2	28.57
KRH06301	Soybean	plasma membrane	41.23	27.61
Solyc03g123780.2.1	Tomato	plasma membrane	35.62	27.4
KRH47735	Soybean	plasma membrane	37.31	26.81
KRH68996	Soybean	plasma membrane	37.17	26.77
PGSC0003DMT400023733	Potato	plasma membrane	39.13	25.64
Bra008027.1-P	Field mustard	plasma membrane	38.43	25.44
Bra016068.1-P	Field mustard	plasma membrane	38.71	25.39
CDX96394	Canola	plasma membrane	38.71	25.37
AT1G72300.1	Thale cress	plasma membrane	38.85	25.3
CDX82157	Canola	plasma membrane	38.01	25.16
TraesCS2D01G263500.1	Wheat	plasma membrane	35.2	24.66
TraesCS2D01G551200.1	Wheat	plasma membrane	35.48	24.23
TraesCS6D01G213000.1	Wheat	plasma membrane	35.2	23.86
TraesCS6D01G052100.1	Wheat	plasma membrane	35.76	23.65
CDY03644	Canola	plasma membrane	28.19	23.29
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF12
SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G119600	EnsemblPlants:TraesCS6D01G119600.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:84628841..84630982

Molecular Weight (calculated)

77799.1 Da

IEP (calculated)

5.739

GRAVY (calculated)

0.122

Length

713 amino acids

Sequence
(BLAST)

001: MRFFTVPPVV LQLFVLLILA SPATACTEQE KRNLLGFLAG LSQDGGLATS WCDNGMDCCE WEGITCNGDG AVTEVSLASR GLEGRILPSL ADLASLQRVN
101: LSYNSFSGGL PLELMSSGSI IILDVSFSQL NGPLPELPSL VTADRPLQVL NISSNQFSSE FPSAIWKMTK NLIALNASNN SFTGHIPSSL CLGSPSLALL
201: DLCYNRLSGD IPTTLGDCSK LKVLKVGHNN LSGTLPVETF RATSLEYLSL PDNGLQGELD GAHMIKLSNL LTLDLGGNHF GGNIPESIGQ LRSLEELHLG
301: SNNMSGELPS TMGNCTNLKT IDLKFNNFSG DLGKVKFATL QNLKSLDLMS NNLSGMLPES IYSCRNLTAL RLSYNNFHGE ISLRIGNLKH LSFLSLVRNS
401: FTNITKTLHG LKSCKNISVL LIGKTFMNEV MPQDETIHGF QNLQHLAIHQ CSLTGRIPIW LSKLTNLKML DLYSNQLTGP MPSWINSLNH LFRLDVSNNS
501: LTGEIPITLM QMPMFKSDKA AIYSDPSLLD LDLIIYVAES STVQYRIDSA WAKVLNLGKN KFTGVIPQEI GQLKALLFLD LSSNNFYGVI PQSICDLTNL
601: QQLDLSNNHL TGEIPAALEI LRFLSQFNIS YNDLEGPIPT TGQLSTFQTS SFDGNPKLCG SLLIRDCSSV EEAPVHIISA KECSTKVIFA IAFGLFFGVG
701: VLYDQLVLFR YFG

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.