Factsheet for TraesCS6D01G119500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G119100.1	Wheat	cytosol, golgi, peroxisome	47.61	84.33
TraesCS6D01G119000.1	Wheat	plasma membrane	34.69	81.25
TraesCS6D01G119600.1	Wheat	plasma membrane	81.04	80.93
TraesCS6D01G118900.1	Wheat	extracellular	78.65	78.87
TraesCS4D01G038100.1	Wheat	extracellular	70.37	70.17
HORVU6Hr1G024800.2	Barley	cytosol, plasma membrane	71.91	64.32
TraesCS6D01G116900.1	Wheat	extracellular, plasma membrane	61.1	62.59
TraesCS6D01G117600.1	Wheat	cytosol, golgi, peroxisome	56.74	61.21
TraesCS7D01G441600.1	Wheat	cytosol, plasma membrane	40.03	60.9
TraesCS6D01G117200.1	Wheat	plasma membrane	59.69	60.8
TraesCS6D01G117400.1	Wheat	plasma membrane, vacuole	59.97	60.06
TraesCS6D01G116700.1	Wheat	plasma membrane	60.39	59.89
TraesCS6D01G117900.1	Wheat	plasma membrane, vacuole	38.76	58.85
TraesCS6D01G081500.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	39.75	58.47
TraesCS6D01G116500.1	Wheat	plasma membrane	58.43	58.43
TraesCS6D01G118000.1	Wheat	plastid	60.25	58.05
TraesCS6D01G116800.1	Wheat	vacuole	29.92	57.57
EES06303	Sorghum	plasma membrane	58.71	56.87
TraesCS6D01G115800.1	Wheat	plasma membrane	58.99	56.53
Os02t0155700-00	Rice	plasma membrane	47.47	55.87
TraesCS6D01G116600.1	Wheat	plastid	45.08	55.73
TraesCS7D01G401700.1	Wheat	golgi, vacuole	48.31	54.26
TraesCS7D01G425500.1	Wheat	plasma membrane	52.11	52.03
TraesCS6D01G119400.1	Wheat	plastid	52.67	52.01
TraesCS7D01G425600.1	Wheat	plasma membrane	53.37	51.63
TraesCS6D01G116100.1	Wheat	plasma membrane	62.36	42.29
TraesCS6D01G115200.2	Wheat	plasma membrane	61.38	41.58
TraesCS6D01G114600.1	Wheat	plasma membrane	61.1	41.39
TraesCS6D01G115700.1	Wheat	plasma membrane	61.1	41.08
TraesCS6D01G115300.1	Wheat	plasma membrane	59.83	40.61
TraesCS6D01G115400.1	Wheat	plasma membrane	59.97	40.36
TraesCS6D01G115900.1	Wheat	plasma membrane	58.29	40.33
TraesCS6D01G114800.1	Wheat	plasma membrane	60.11	40.3
TraesCS6D01G115100.1	Wheat	plasma membrane	59.27	40.15
TraesCS6D01G115000.1	Wheat	plasma membrane	53.23	38.17
TraesCS6D01G116000.1	Wheat	plasma membrane	46.07	37.61
CDX83918	Canola	mitochondrion, plasma membrane	35.81	37.39
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	35.81	37.39
TraesCS7D01G426000.1	Wheat	plasma membrane	55.62	37.25
CDX96780	Canola	mitochondrion, plasma membrane	35.67	37.24
AT1G17240.2	Thale cress	plasma membrane	38.34	37.19
AT1G17250.1	Thale cress	plasma membrane	37.78	35.58
CDX81812	Canola	extracellular, plasma membrane	24.44	32.34
TraesCS2D01G551600.1	Wheat	extracellular, plasma membrane, vacuole	33.57	32.08
TraesCS2D01G551700.1	Wheat	plastid	25.98	31.95
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.92	31.94
KRH06825	Soybean	cytosol, extracellular, nucleus	6.04	31.62
TraesCS2D01G551800.1	Wheat	extracellular, plasma membrane	32.58	30.49
CDY48482	Canola	plasma membrane	28.65	29.69
TraesCS7D01G425700.1	Wheat	plasma membrane	43.96	28.93
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	43.68	28.85
KRH06301	Soybean	plasma membrane	41.29	27.61
Solyc03g123780.2.1	Tomato	plasma membrane	35.25	27.08
KRH47735	Soybean	plasma membrane	37.5	26.92
KRH68996	Soybean	plasma membrane	37.22	26.77
Bra008027.1-P	Field mustard	plasma membrane	39.19	25.91
CDX82157	Canola	plasma membrane	38.76	25.63
Bra016068.1-P	Field mustard	plasma membrane	39.04	25.57
CDX96394	Canola	plasma membrane	39.04	25.55
AT1G72300.1	Thale cress	plasma membrane	39.19	25.48
PGSC0003DMT400023733	Potato	plasma membrane	38.76	25.37
TraesCS6D01G052100.1	Wheat	plasma membrane	37.08	24.49
TraesCS2D01G551200.1	Wheat	plasma membrane	35.11	23.95
TraesCS2D01G263500.1	Wheat	plasma membrane	33.99	23.77
TraesCS6D01G213000.1	Wheat	plasma membrane	34.97	23.67
CDY03644	Canola	plasma membrane	28.23	23.29
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G119500.1	EnsemblPlantsGene:TraesCS6D01G119500	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR43932	PANTHER:PTHR43932:SF12	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	SEG:seg
SignalP:SignalP-noTM	SMART:SM00369	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:84617872..84620010

Molecular Weight (calculated)

78123.6 Da

IEP (calculated)

6.768

GRAVY (calculated)

0.111

Length

712 amino acids

Sequence
(BLAST)

001: MHFFNVPTAV LQLFVLLILA SPTTACTKQE KCYLLRFLAG LSRDGGLATS WRDSSTDCCE WLGITCNGDG TVTEVSLASR GLEGRISRSL ADLTSLLHVN
101: LSYNSFSGGL PPELMSSRSI IVLDVSFCQL NGPLPELPSL VTTDWPLQVL NISSNQFSSE FPSATWKMMK NLIALNASNN SFTGQIPSSL CLGSPSLALL
201: DLCYNQLSGD IPTALGDCSK LKVLKVGHNN LSGTLPVEIF CATSLEYLSF PNNALQGELD GAHIVKLSNL LTLDLGGNSF SGNFPESIDQ LRRLEELHLG
301: SNKMSGELPS TLSNCTHLKT IDLKINNFSG DLGNINFSSL QSLKYLDLIR NNLSGIVPES IYSCSNLTAL RLSDNHFHGE ISLRIGNLKH LSFLSLSQNS
401: FTNITKALHA IKSCRNISTL LIGRNFMNEA MPQDETIDGF QNLQCLAMEW CSLTGRIPIW LSKLRNLKIL VLLSNRLTGP MPRWINSLNH LFRLDISNNS
501: LTGKIPMTLM EMPMLKSDKP AIYLDPSLLD LPIYVDSANG KLQYRMGSAW PKVLNLGNNK FTGVIPQEIS HLKALLYLNL SFNNFYGEIP QSIGNLAILQ
601: RLDLSNNHLS GEIPAALQIL HFLSEFNISN NDLEGPIPTT GQLSTFQASS FNGNPKLCGP MLINHCDSVE APPISIISAK QCSNKVIFVI AFGLFFGVGV
701: LYDQLVLFRY FG

Best Arabidopsis Sequence Match ( AT1G17240.1 )
(BLAST)

001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.