Factsheet for TraesCS6D01G116700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 3
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G117600.1	Wheat	cytosol, golgi, peroxisome	67.13	73.03
TraesCS7D01G441600.1	Wheat	cytosol, plasma membrane	46.1	70.73
TraesCS6D01G116500.1	Wheat	plasma membrane	65.6	66.15
TraesCS6D01G116900.1	Wheat	extracellular, plasma membrane	63.23	65.32
TraesCS6D01G117900.1	Wheat	plasma membrane, vacuole	42.2	64.61
TraesCS6D01G116800.1	Wheat	vacuole	33.01	64.05
TraesCS6D01G117200.1	Wheat	plasma membrane	61.14	62.8
TraesCS6D01G119000.1	Wheat	plasma membrane	26.46	62.5
TraesCS6D01G115800.1	Wheat	plasma membrane	63.79	61.64
TraesCS6D01G116600.1	Wheat	plastid	49.3	61.46
TraesCS6D01G117400.1	Wheat	plasma membrane, vacuole	60.59	61.18
TraesCS6D01G081500.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	41.09	60.95
TraesCS6D01G119500.1	Wheat	extracellular, plasma membrane, vacuole	59.89	60.39
TraesCS6D01G118000.1	Wheat	plastid	61.42	59.68
TraesCS6D01G118900.1	Wheat	extracellular	58.36	59.01
TraesCS4D01G038100.1	Wheat	extracellular	58.5	58.82
TraesCS6D01G119600.1	Wheat	plasma membrane	57.94	58.34
TraesCS6D01G119400.1	Wheat	plastid	56.82	56.59
TraesCS7D01G401700.1	Wheat	golgi, vacuole	49.72	56.31
TraesCS6D01G119100.1	Wheat	cytosol, golgi, peroxisome	31.2	55.72
TraesCS6D01G115100.1	Wheat	plasma membrane	81.48	55.66
TraesCS7D01G425500.1	Wheat	plasma membrane	54.87	55.26
TraesCS7D01G425600.1	Wheat	plasma membrane	56.27	54.89
TraesCS6D01G115700.1	Wheat	plasma membrane	73.82	50.05
TraesCS6D01G115400.1	Wheat	plasma membrane	73.26	49.72
TraesCS6D01G115900.1	Wheat	plasma membrane	71.17	49.66
TraesCS6D01G116100.1	Wheat	plasma membrane	70.75	48.38
TraesCS6D01G115200.2	Wheat	plasma membrane	69.78	47.67
TraesCS6D01G115300.1	Wheat	plasma membrane	68.66	47.0
TraesCS6D01G115000.1	Wheat	plasma membrane	64.21	46.42
Os02t0154000-00	Rice	plasma membrane	64.21	44.07
Os02t0153700-01	Rice	plasma membrane	64.21	44.03
TraesCS6D01G114800.1	Wheat	plasma membrane	63.37	42.84
TraesCS6D01G114600.1	Wheat	plasma membrane	61.84	42.25
CDX83918	Canola	mitochondrion, plasma membrane	38.16	40.18
CDX96780	Canola	mitochondrion, plasma membrane	37.88	39.88
Bra016611.1-P	Field mustard	mitochondrion, plasma membrane	37.74	39.74
TraesCS7D01G426000.1	Wheat	plasma membrane	58.36	39.42
AT1G17240.2	Thale cress	plasma membrane	39.83	38.96
TraesCS6D01G116000.1	Wheat	plasma membrane	45.54	37.5
AT1G17250.1	Thale cress	plasma membrane	39.28	37.3
CDX81812	Canola	extracellular, plasma membrane	26.32	35.13
CDY48482	Canola	plasma membrane	31.2	32.61
TraesCS2D01G551600.1	Wheat	extracellular, plasma membrane, vacuole	33.43	32.21
TraesCS2D01G551700.1	Wheat	plastid	25.77	31.95
Bra025987.1-P	Field mustard	cytosol, golgi, plasma membrane	12.81	31.94
TraesCS2D01G551800.1	Wheat	extracellular, plasma membrane	33.15	31.27
KRH06301	Soybean	plasma membrane	43.73	29.48
KRH06825	Soybean	cytosol, extracellular, nucleus	5.57	29.41
KRH47735	Soybean	plasma membrane	40.11	29.03
VIT_09s0002g00080.t01	Wine grape	plasma membrane, plastid	43.18	28.76
Solyc03g123780.2.1	Tomato	plasma membrane	36.35	28.16
KRH68996	Soybean	plasma membrane	38.72	28.08
TraesCS7D01G425700.1	Wheat	plasma membrane	42.2	28.0
Bra016068.1-P	Field mustard	plasma membrane	40.81	26.95
CDX96394	Canola	plasma membrane	40.81	26.93
Bra008027.1-P	Field mustard	plasma membrane	40.11	26.74
CDX82157	Canola	plasma membrane	39.55	26.37
AT1G72300.1	Thale cress	plasma membrane	39.83	26.12
PGSC0003DMT400023733	Potato	plasma membrane	39.28	25.92
TraesCS6D01G052100.1	Wheat	plasma membrane	38.3	25.51
TraesCS2D01G263500.1	Wheat	plasma membrane	35.65	25.15
TraesCS6D01G213000.1	Wheat	plasma membrane	35.93	24.52
TraesCS2D01G551200.1	Wheat	plasma membrane	35.52	24.43
CDY03644	Canola	plasma membrane	27.99	23.29
CDY72222	Canola	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR43932	PANTHER:PTHR43932:SF7
SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G116700	EnsemblPlants:TraesCS6D01G116700.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:83018680..83020836

Molecular Weight (calculated)

78687.9 Da

IEP (calculated)

6.564

GRAVY (calculated)

-0.054

Length

718 amino acids

Sequence
(BLAST)

001: MQSLHFSFKT HNTELRIRSL GLALVLLISL ASPTSSCTEQ EKTSFLRFLA GLSWDGGLAA SWRNNTDCCK WEGITCRQDS MVTKVMVASR GLEGHISESL
101: GNLTGLQYLN LSHNSLSGGL PLELVSSNSI TVLDVSFNQL NGTLHELPSS TPAWPLQVLN ISSNLFAGQF PSTTWKAMEN LIALNASNNS FTGQIPTHFC
201: SSSPSLAVLD LRLNKFSGNI PKELGDCSKL RELRAGYNNI SGQVPDELFN ATSLECLSFP NNDLNGLIDG AHITNLRNLV TLDLGGNNFS GKIPDSIGQL
301: KKLEEFHLDN NNLSGELPSA LSNCTNLAVL VLSSNKFSGQ LTKVNFSNLP NLRTLDVYYN NFTGTVPESI YSCSNLTALR VSTNKLDGQL SPRISDLKSL
401: TFLSLSTNRF RNITNALQIL KSCRNLTTLL IGDNFKQEFM TEDDRIDGFE KLQVLDIEDC QLSGKIPLWI SRLTNLEMLL LNRNRLTGPI PGWINSLSHL
501: FYMDVSNNSL TGQIPLTLTE MPMLKSTYST THWNPSVFEL TVNSGLSLQY RTITSFPSVL NLSNNNLAGV IPPQIGQLKM LGALDFSFNK LSGQIPQAIC
601: NLTNLQVLDL SNNNLTGDIP AALNSLHFLS AFSISNNDLQ GPIPSGGQFN TFQNSSFDGN PKLCGSVLTQ KCNSAEEHHI LSAKQTDYKV AFVVAFSAFF
701: GVGVLYDQLV LSRYFVKS

Best Arabidopsis Sequence Match ( AT1G17240.2 )
(BLAST)

001: MIDKEMRSKA KGLVRPLITK PVQPLSSHMH LFLLCILFLS ALFLTLSEAV CNLQDRESLI WFSGNVSSSV SPLNWNLSID CCSWEGITCD DSSDSHVTVI
101: SLPSRGLSGT LASSVQNIHR LSRLDLSYNR LSGPLPPGFF STLDQLMILN LSYNSFNGEL PLEQAFGNES NRFFSIQTLD LSSNLLEGEI LRSSVYLQGT
201: INLISFNVSN NSFTGPIPSF MCRSSPQLSK LDFSYNDFSG HISQELGRCL RLTVLQAGFN NLSGVIPSEI YNLSELEQLF LPANQLTGKI DNNITRLRKL
301: TSLALYSNHL EGEIPMDIGN LSSLRSLQLH INNINGTVPL SLANCTKLVK LNLRVNQLGG GLTELEFSQL QSLKVLDLGN NSFTGALPDK IFSCKSLTAI
401: RFAGNKLTGE ISPQVLELES LSFMGLSDNK LTNITGALSI LQGCRKLSTL ILAKNFYDET VPSKEDFLSP DGFPKLRIFG VGACRLRGEI PAWLINLNKV
501: EVMDLSMNRF VGSIPGWLGT LPDLFYLDLS DNLLTGELPK ELFQLRALMS QKITENNYLE LPIFLNPNNV TTNQQYNKLY SFPPTIYIRR NNLTGSIPVE
601: VGQLKVLHIL ELLGNNLSGS IPDELSNLTN LERLDLSNNN LSGSIPWSLT NLNFLSYFNV ANNSLEGPIP SEGQFDTFPK ANFEGNPLLC GGVLLTSCKP
701: TRAKENDELN RTFLMGIAIG YFLSFVSILV VRAW

Arabidopsis Description

AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.