Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G128600.1 | Wheat | cytosol, extracellular, golgi | 20.57 | 97.44 |
| TraesCS6B01G157000.1 | Wheat | plasma membrane, plastid | 96.08 | 96.08 |
| TraesCS6A01G128500.1 | Wheat | extracellular | 56.16 | 93.05 |
| TraesCS6D01G117200.1 | Wheat | plasma membrane | 87.28 | 92.27 |
| TraesCS6D01G116900.1 | Wheat | extracellular, plasma membrane | 76.45 | 81.3 |
| TraesCS6D01G117400.1 | Wheat | plasma membrane, vacuole | 75.51 | 78.48 |
| TraesCS6D01G116800.1 | Wheat | vacuole | 38.7 | 77.3 |
| TraesCS6D01G117900.1 | Wheat | plasma membrane, vacuole | 48.85 | 76.97 |
| Os02t0156400-01 | Rice | cytosol, mitochondrion, plasma membrane, vacuole | 63.87 | 65.74 |
| EES06299 | Sorghum | plasma membrane | 61.84 | 64.19 |
| TraesCS7D01G441600.1 | Wheat | cytosol, plasma membrane | 40.19 | 63.46 |
| TraesCS6D01G117600.1 | Wheat | cytosol, golgi, peroxisome | 56.16 | 62.88 |
| TraesCS6D01G116700.1 | Wheat | plasma membrane | 59.68 | 61.42 |
| OQU84820 | Sorghum | extracellular, plastid, vacuole | 28.01 | 61.06 |
| TraesCS6D01G119100.1 | Wheat | cytosol, golgi, peroxisome | 33.15 | 60.95 |
| TraesCS6D01G116500.1 | Wheat | plasma membrane | 58.32 | 60.53 |
| TraesCS6D01G081500.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 39.51 | 60.33 |
| TraesCS6D01G115800.1 | Wheat | plasma membrane | 60.62 | 60.3 |
| TraesCS6D01G119500.1 | Wheat | extracellular, plasma membrane, vacuole | 58.05 | 60.25 |
| TraesCS6D01G118900.1 | Wheat | extracellular | 57.78 | 60.14 |
| TraesCS6D01G119600.1 | Wheat | plasma membrane | 56.83 | 58.91 |
| TraesCS4D01G038100.1 | Wheat | extracellular | 56.7 | 58.68 |
| TraesCS6D01G119000.1 | Wheat | plasma membrane | 23.95 | 58.22 |
| TraesCS6D01G116600.1 | Wheat | plastid | 45.33 | 58.16 |
| TraesCS7D01G401700.1 | Wheat | golgi, vacuole | 49.8 | 58.04 |
| TraesCS6D01G119400.1 | Wheat | plastid | 55.21 | 56.59 |
| TraesCS7D01G425500.1 | Wheat | plasma membrane | 53.86 | 55.82 |
| TraesCS7D01G425600.1 | Wheat | plasma membrane | 55.21 | 55.43 |
| TraesCS6A01G129000.1 | Wheat | plasma membrane | 89.85 | 55.1 |
| TraesCS6D01G114600.1 | Wheat | plasma membrane | 73.48 | 51.67 |
| Zm00001d005908_P001 | Maize | plastid | 29.91 | 51.28 |
| Os02t0153100-00 | Rice | plasma membrane | 66.04 | 46.43 |
| Os02t0153200-01 | Rice | plasma membrane | 65.9 | 46.38 |
| TraesCS6D01G116100.1 | Wheat | plasma membrane | 64.14 | 45.14 |
| TraesCS6D01G114800.1 | Wheat | plasma membrane | 62.65 | 43.6 |
| TraesCS6D01G115200.2 | Wheat | plasma membrane | 61.03 | 42.91 |
| TraesCS6D01G115300.1 | Wheat | plasma membrane | 60.62 | 42.71 |
| TraesCS6D01G115900.1 | Wheat | plasma membrane | 59.13 | 42.47 |
| TraesCS6D01G115700.1 | Wheat | plasma membrane | 60.49 | 42.21 |
| TraesCS6D01G115100.1 | Wheat | plasma membrane | 59.81 | 42.06 |
| TraesCS6D01G115400.1 | Wheat | plasma membrane | 59.68 | 41.68 |
| TraesCS6D01G115000.1 | Wheat | plasma membrane | 53.86 | 40.08 |
| TraesCS7D01G426000.1 | Wheat | plasma membrane | 56.43 | 39.23 |
| CDX83918 | Canola | mitochondrion, plasma membrane | 35.99 | 39.0 |
| TraesCS6D01G116000.1 | Wheat | plasma membrane | 46.01 | 38.99 |
| CDX96780 | Canola | mitochondrion, plasma membrane | 35.72 | 38.71 |
| Bra016611.1-P | Field mustard | mitochondrion, plasma membrane | 35.72 | 38.71 |
| AT1G17240.2 | Thale cress | plasma membrane | 37.75 | 38.01 |
| AT1G17250.1 | Thale cress | plasma membrane | 36.94 | 36.11 |
| TraesCS2D01G551700.1 | Wheat | plastid | 27.33 | 34.89 |
| CDX81812 | Canola | extracellular, plasma membrane | 24.63 | 33.83 |
| TraesCS2D01G551600.1 | Wheat | extracellular, plasma membrane, vacuole | 33.96 | 33.69 |
| Bra025987.1-P | Field mustard | cytosol, golgi, plasma membrane | 12.72 | 32.64 |
| TraesCS2D01G551800.1 | Wheat | extracellular, plasma membrane | 32.48 | 31.54 |
| KRH06825 | Soybean | cytosol, extracellular, nucleus | 5.68 | 30.88 |
| CDY48482 | Canola | plasma membrane | 28.42 | 30.57 |
| VIT_09s0002g00080.t01 | Wine grape | plasma membrane, plastid | 41.81 | 28.66 |
| TraesCS7D01G425700.1 | Wheat | plasma membrane | 41.95 | 28.65 |
| Solyc03g123780.2.1 | Tomato | plasma membrane | 35.32 | 28.16 |
| KRH06301 | Soybean | plasma membrane | 40.46 | 28.08 |
| KRH47735 | Soybean | plasma membrane | 37.21 | 27.72 |
| KRH68996 | Soybean | plasma membrane | 36.13 | 26.97 |
| PGSC0003DMT400023733 | Potato | plasma membrane | 38.57 | 26.19 |
| Bra008027.1-P | Field mustard | plasma membrane | 38.02 | 26.09 |
| CDX82157 | Canola | plasma membrane | 37.75 | 25.91 |
| Bra016068.1-P | Field mustard | plasma membrane | 37.62 | 25.57 |
| CDX96394 | Canola | plasma membrane | 37.62 | 25.55 |
| AT1G72300.1 | Thale cress | plasma membrane | 37.48 | 25.3 |
| TraesCS2D01G263500.1 | Wheat | plasma membrane | 34.51 | 25.05 |
| TraesCS6D01G052100.1 | Wheat | plasma membrane | 35.86 | 24.58 |
| TraesCS2D01G551200.1 | Wheat | plasma membrane | 34.64 | 24.52 |
| TraesCS6D01G213000.1 | Wheat | plasma membrane | 34.51 | 24.24 |
| CDY03644 | Canola | plasma membrane | 28.01 | 23.99 |
| CDY72222 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G118000.1 | EnsemblPlantsGene:TraesCS6D01G118000 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| PANTHER:PTHR43932 | PANTHER:PTHR43932:SF1 | PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | SEG:seg |
| SMART:SM00369 | SUPFAM:SSF52058 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6D:+:83540491..83542710
Molecular Weight (calculated)
80069.4 Da
IEP (calculated)
5.223
GRAVY (calculated)
0.058
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSEWTVSGN CQTKIFRMGS STTTPCSNGF SYSRYTKKSH MPSLGLALVL LVSLVSPTSS CTEQEKSSLL QLLAGLSQDG DLTTTWRHGT DCCTWEGITC
101: NQDRKVTDVS LASRGLEGPI SPFLGNLTGL LRLNLSRNLL SGGLPLELVS SSSILVLDIS FNRLTGGLSE LPSSTPARPL QVLNISSNLL TGILPSTTWE
201: VMKSLVVFNA SSNRFTGQIP TTPCVSAPSF AVLELSFNQL SGNIPSGLGN CSVLKLLGAG YNKLSGTLPD ELFKVTSLEH LSLPNNWLEG ALDDISKLIN
301: LVTLDLGGNE LSGNIPESIG GLKRLEELHL EHNSMSGELP AALSNCTNLV TIDLKANQFS GELTKVNFVS LSNLKKLDLL SNNFTGTVPE SIYSCSKLTA
401: LRLSYNPFHG QLSEKIGNLK SLLFLSLANN SLTNITRTLQ MLSSSRSLTT LYIGCNFLHE TMPEDVSIDG FQNLQVLYIN HCSLSGKIPD WLSKLPNLEM
501: LFLQGNQLTG PIPEWISSLN FLFSLDISNN SLTGEIPSAL MEMPMLESDN TAPKVFFELP VWNKNQFLQY LTPSAFPKEL NLAMNNFSGM IPEEIGQLQG
601: LFSLNLSSNR LSGEIPEQIC NLTNLQMLDL SGNHLTGKIP AALNNLHFLS RFNISNNDLE GPIPNMGQFS TFPDSSFGGN PKLCGPMVAN HCGSAEASPV
701: SIDPIKQIGS EAIIFMTAFG VFFGVGVLYD QKVLARHFG
101: NQDRKVTDVS LASRGLEGPI SPFLGNLTGL LRLNLSRNLL SGGLPLELVS SSSILVLDIS FNRLTGGLSE LPSSTPARPL QVLNISSNLL TGILPSTTWE
201: VMKSLVVFNA SSNRFTGQIP TTPCVSAPSF AVLELSFNQL SGNIPSGLGN CSVLKLLGAG YNKLSGTLPD ELFKVTSLEH LSLPNNWLEG ALDDISKLIN
301: LVTLDLGGNE LSGNIPESIG GLKRLEELHL EHNSMSGELP AALSNCTNLV TIDLKANQFS GELTKVNFVS LSNLKKLDLL SNNFTGTVPE SIYSCSKLTA
401: LRLSYNPFHG QLSEKIGNLK SLLFLSLANN SLTNITRTLQ MLSSSRSLTT LYIGCNFLHE TMPEDVSIDG FQNLQVLYIN HCSLSGKIPD WLSKLPNLEM
501: LFLQGNQLTG PIPEWISSLN FLFSLDISNN SLTGEIPSAL MEMPMLESDN TAPKVFFELP VWNKNQFLQY LTPSAFPKEL NLAMNNFSGM IPEEIGQLQG
601: LFSLNLSSNR LSGEIPEQIC NLTNLQMLDL SGNHLTGKIP AALNNLHFLS RFNISNNDLE GPIPNMGQFS TFPDSSFGGN PKLCGPMVAN HCGSAEASPV
701: SIDPIKQIGS EAIIFMTAFG VFFGVGVLYD QKVLARHFG
001: MRSKAKGLVR PLITKPVQPL SSHMHLFLLC ILFLSALFLT LSEAVCNLQD RESLIWFSGN VSSSVSPLNW NLSIDCCSWE GITCDDSSDS HVTVISLPSR
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
101: GLSGTLASSV QNIHRLSRLD LSYNRLSGPL PPGFFSTLDQ LMILNLSYNS FNGELPLEQA FGNESNRFFS IQTLDLSSNL LEGEILRSSV YLQGTINLIS
201: FNVSNNSFTG PIPSFMCRSS PQLSKLDFSY NDFSGHISQE LGRCLRLTVL QAGFNNLSGV IPSEIYNLSE LEQLFLPANQ LTGKIDNNIT RLRKLTSLAL
301: YSNHLEGEIP MDIGNLSSLR SLQLHINNIN GTVPLSLANC TKLVKLNLRV NQLGGGLTEL EFSQLQSLKV LDLGNNSFTG ALPDKIFSCK SLTAIRFAGN
401: KLTGEISPQV LELESLSFMG LSDNKLTNIT GALSILQGCR KLSTLILAKN FYDETVPSKE DFLSPDGFPK LRIFGVGACR LRGEIPAWLI NLNKVEVMDL
501: SMNRFVGSIP GWLGTLPDLF YLDLSDNLLT GELPKELFQL RALMSQKITE NNYLELPIFL NPNNVTTNQQ YNKLYSFPPT IYIRRNNLTG SIPVEVGQLK
601: VLHILELLGN NLSGSIPDEL SNLTNLERLD LSNNNLSGSI PWSLTNLNFL SYFNVANNSL EGPIPSEGQF DTFPKANFEG NPLLCGGVLL TSCKPTRAKE
701: NDELNRTFLM GIAIGYFLSF VSILVVRAW
Arabidopsis Description
AtRLP2receptor like protein 2 [Source:TAIR;Acc:AT1G17240]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.